Aev_g33118 (RPL23AB)

Aliases : RPL23AB

Description : component *(uL23) of large ribosomal-subunit (LSU) proteome & original description: none

Gene families : OG0000443 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0000443_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aev_g33118
Cluster	HCCA: Cluster_75

Target	Alias	Description	ECC score	Gene Family Method
Ala_g31538	RPL23AB	component *(uL23) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 39 species
Aob_g05478	RPL23AB	component *(uL23) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 39 species
Aob_g06934	RPL23AB	component *(uL23) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 39 species
Aop_g18428	RPL23AB	component *(uL23) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 39 species
Aspi01Gene46927.t1	RPL23AB, Aspi01Gene46927	component *(uL23) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 39 species
Cba_g30076	RPL23AB	component *(uL23) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 39 species
Cba_g50693	RPL23AB	component *(uL23) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 39 species
Dac_g14569	RPL23AB	component *(uL23) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 39 species
GSVIVT01025606001	No alias	60S ribosomal protein L23a-1 OS=Arabidopsis thaliana	0.01	OrthoFinder output from all 39 species
Gb_18935	RPL23AB	component RPL23a of LSU proteome component	0.01	OrthoFinder output from all 39 species
Gb_38537	RPL23AB	component RPL23a of LSU proteome component	0.01	OrthoFinder output from all 39 species
Len_g26873	RPL23AB	component *(uL23) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 39 species
MA_10430928g0010	RPL23AB	component RPL23a of LSU proteome component	0.01	OrthoFinder output from all 39 species
MA_10436962g0020	RPL23A, RPL23AA, ATRPL23A	component RPL23a of LSU proteome component	0.01	OrthoFinder output from all 39 species
Nbi_g12753	RPL23AB	component *(uL23) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 39 species
Smo271663	RPL23AB	Protein biosynthesis.cytosolic ribosome.large subunit...	0.01	OrthoFinder output from all 39 species
Solyc10g086330.2.1	RPL23AB, Solyc10g086330	component RPL23a of LSU proteome component	0.02	OrthoFinder output from all 39 species
Spa_g01808	RPL23AB	component *(uL23) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 39 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006457	protein folding	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
MF	GO:0008234	cysteine-type peptidase activity	IEP	HCCA
CC	GO:0009521	photosystem	IEP	HCCA
CC	GO:0009522	photosystem I	IEP	HCCA
CC	GO:0009538	photosystem I reaction center	IEP	HCCA
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	HCCA
BP	GO:0010109	regulation of photosynthesis	IEP	HCCA
BP	GO:0010207	photosystem II assembly	IEP	HCCA
MF	GO:0010242	oxygen evolving activity	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
CC	GO:0030117	membrane coat	IEP	HCCA
CC	GO:0030118	clathrin coat	IEP	HCCA
CC	GO:0030120	vesicle coat	IEP	HCCA
CC	GO:0030125	clathrin vesicle coat	IEP	HCCA
CC	GO:0030130	clathrin coat of trans-Golgi network vesicle	IEP	HCCA
CC	GO:0030132	clathrin coat of coated pit	IEP	HCCA
BP	GO:0031323	regulation of cellular metabolic process	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
BP	GO:0042548	regulation of photosynthesis, light reaction	IEP	HCCA
BP	GO:0042549	photosystem II stabilization	IEP	HCCA
BP	GO:0043467	regulation of generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
MF	GO:0044183	protein folding chaperone	IEP	HCCA
BP	GO:0050789	regulation of biological process	IEP	HCCA
BP	GO:0050794	regulation of cellular process	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA
BP	GO:0065007	biological regulation	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA
CC	GO:0098797	plasma membrane protein complex	IEP	HCCA
MF	GO:0140662	ATP-dependent protein folding chaperone	IEP	HCCA
CC	GO:1990204	oxidoreductase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005633	Ribosomal_L23/L25_N	15	64
IPR013025	Ribosomal_L25/23	74	136

External Links

No external refs found!

Aev_g33118 (RPL23AB)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation