Aspi01Gene32466.t1 (Aspi01Gene32466)


Aliases : Aspi01Gene32466

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene32466.t1
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00076010 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
AMTR_s00010p00113430 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g18485... 0.02 OrthoFinder output from all 47 species
AT3G26782 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g028250 LOI1, MEF11 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g034754 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g036824 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g098989 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099097 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099216 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g110646 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18190 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17273 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19051 DOT4 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g22321 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g26414 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g26666 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g38981 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g62749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g63777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g22677 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04619 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09405 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14571 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g25195 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28232 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g70449 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene16549.t1 EMB2261, Aspi01Gene16549 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene18566.t1 Aspi01Gene18566 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene28610.t1 REME1, Aspi01Gene28610 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene41281.t1 OTP84, Aspi01Gene41281 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0119.g046740 No alias not classified & original description: CDS=1-2259 0.04 OrthoFinder output from all 47 species
Azfi_s1395.g102559 No alias not classified & original description: CDS=1-912 0.04 OrthoFinder output from all 47 species
Azfi_s3922.g117339 No alias not classified & original description: CDS=1-831 0.04 OrthoFinder output from all 47 species
Cba_g05270 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g06233 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07325 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g29022 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g66834 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67780 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67843 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G071400.1 Ceric.02G071400 not classified & original description: pacid=50584970... 0.03 OrthoFinder output from all 47 species
Dac_g09096 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g12138 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18747 No alias ssDNA-binding protein *(OSB) & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g19560 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30419 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35260 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g35515 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g10089 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22174 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g51669 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g04197 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g16246 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g17788 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18520 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18930 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g19011 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g20972 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g24341 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26306 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g54668 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g54937 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06276 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g07379 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07418 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07430 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g15182 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g15303 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g19989 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33311 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_20782g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.04 OrthoFinder output from all 47 species
MA_237076g0010 No alias Pentatricopeptide repeat-containing protein At1g20230... 0.04 OrthoFinder output from all 47 species
Msp_g22363 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28110 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g34535 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g43591 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g44357 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g38613 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27204 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g01662 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g04317 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g05223 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g11801 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g11826 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g14318 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16520 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57343 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g63187 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63506 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g02677 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06929 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29583 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g43260 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16066 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g09894 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23793 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g28071 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g33790 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g10541 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g12719 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g23253 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e030605_P001 Zm00001e030605 Pentatricopeptide repeat-containing protein At1g31430... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 288 335
IPR002885 Pentatricopeptide_repeat 88 136
IPR002885 Pentatricopeptide_repeat 189 235
IPR002885 Pentatricopeptide_repeat 164 184
No external refs found!