Aspi01Gene31778.t2 (RR12, ARR12, Aspi01Gene31778)

Aliases : RR12, ARR12, Aspi01Gene31778

Description : subgroup ARR-B transcription factor & original description: none

Gene families : OG0000124 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000124_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene31778.t2

Target	Alias	Description	ECC score	Gene Family Method
AT3G10760	No alias	Homeodomain-like superfamily protein	0.03	OrthoFinder output from all 47 species
AT4G16110	RR2, ARR2	response regulator 2	0.03	OrthoFinder output from all 47 species
Ala_g19620	MYBC1	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g58078	MYBC1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g70563	RR12, ARR12	subgroup ARR-B transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene69302.t1	LUX, PCL1,...	component *(LUX) of circadian clock Evening complex (EC)...	0.04	OrthoFinder output from all 47 species
Cba_g10999	LUX, PCL1	component *(LUX) of circadian clock Evening complex (EC)...	0.04	OrthoFinder output from all 47 species
Cba_g13893	ARR11	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Ceric.16G029800.1	ARR11, Ceric.16G029800	subgroup ARR-B transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ceric.17G049600.1	LUX, PCL1,...	component *(LUX) of circadian clock Evening complex (EC)...	0.06	OrthoFinder output from all 47 species
Ceric.1Z080900.1	MYBC1, Ceric.1Z080900	not classified & original description: pacid=50607904...	0.04	OrthoFinder output from all 47 species
Dde_g40960	LUX, PCL1	component *(LUX) of circadian clock Evening complex (EC)...	0.03	OrthoFinder output from all 47 species
Ehy_g11168	No alias	component *(LUX) of circadian clock Evening complex (EC)...	0.04	OrthoFinder output from all 47 species
Ehy_g17923	ARR11	subgroup ARR-B transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01010627001	ARR1, RR1	RNA biosynthesis.transcriptional activation.ARR-B...	0.03	OrthoFinder output from all 47 species
GSVIVT01029177001	ARR10, RR10	RNA biosynthesis.transcriptional activation.ARR-B...	0.03	OrthoFinder output from all 47 species
GSVIVT01035051001	ARR1, RR1	RNA biosynthesis.transcriptional activation.ARR-B...	0.03	OrthoFinder output from all 47 species
LOC_Os05g34110.1	LOC_Os05g34110	Transcription factor MYBC1 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Len_g14226	No alias	component *(LUX) of circadian clock Evening complex (EC)...	0.04	OrthoFinder output from all 47 species
Len_g49270	LUX, PCL1	component *(LUX) of circadian clock Evening complex (EC)...	0.03	OrthoFinder output from all 47 species
Lfl_g22323	LUX, PCL1	component *(LUX) of circadian clock Evening complex (EC)...	0.03	OrthoFinder output from all 47 species
Msp_g47983	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g02155	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g20473	LUX, PCL1	component *(LUX) of circadian clock Evening complex (EC)...	0.03	OrthoFinder output from all 47 species
Pir_g27542	MYBC1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g05145	LUX, PCL1	component *(LUX) of circadian clock Evening complex (EC)...	0.03	OrthoFinder output from all 47 species
Ppi_g05219	RR12, ARR12	subgroup ARR-B transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011863	MYBC1	not classified & original description: CDS=1-1491	0.04	OrthoFinder output from all 47 species
Solyc01g065540.3.1	ARR1, RR1, Solyc01g065540	B-type cytokinin ARR response activator. transcription...	0.03	OrthoFinder output from all 47 species
Spa_g02524	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g19044	ARR1, RR1	subgroup ARR-B transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g46548	ARR11	subgroup ARR-B transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g28299	RR12, ARR12	subgroup ARR-B transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e013844_P002	RR12, ARR12,...	B-type cytokinin ARR response activator. transcription...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEA	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001789	Sig_transdc_resp-reg_receiver	35	143
IPR001005	SANT/Myb	208	258

External Links

No external refs found!

Aspi01Gene31778.t2 (RR12, ARR12, Aspi01Gene31778)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation