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  5. Aspi01Gene31661.t1

Aspi01Gene31661.t1 (Aspi01Gene31661)


Aliases : Aspi01Gene31661

Description : group-II intron mitochondrial splicing factor *(MISF68) & original description: none


Gene families : OG0000142 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000142_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene31661.t1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00131p00098210 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g13040,... 0.04 OrthoFinder output from all 47 species
AMTR_s00142p00073110 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g73400,... 0.03 OrthoFinder output from all 47 species
Aev_g08644 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g21200 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene46984.t1 Aspi01Gene46984 not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os03g53490.1 LOC_Os03g53490 Pentatricopeptide repeat-containing protein At3g22670,... 0.14 OrthoFinder output from all 47 species
Lfl_g06036 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g10212 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
MA_38485g0010 No alias Pentatricopeptide repeat-containing protein At1g63080,... 0.04 OrthoFinder output from all 47 species
Msp_g00645 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc11g071670.2.1 Solyc11g071670 Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
Zm00001e005655_P001 Zm00001e005655 Pentatricopeptide repeat-containing protein At3g22670,... 0.02 OrthoFinder output from all 47 species
Zm00001e021940_P001 Zm00001e021940 Pentatricopeptide repeat-containing protein At5g18390,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 117 163
IPR002885 Pentatricopeptide_repeat 192 220
IPR002885 Pentatricopeptide_repeat 222 243
IPR002885 Pentatricopeptide_repeat 91 115
No external refs found!