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  5. Aspi01Gene31131.t1

Aspi01Gene31131.t1 (ATCOL5, COL5, Aspi01Gene31131)


Aliases : ATCOL5, COL5, Aspi01Gene31131

Description : floral promoter *(CONSTANS) & original description: none


Gene families : OG0001141 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001141_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene31131.t1

Target Alias Description ECC score Gene Family Method Actions
Als_g13330 ATCOL4, COL4 floral promoter *(CONSTANS) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g009656 ATCOL4, COL4 floral promoter *(CONSTANS) & original description: CDS=186-1232 0.03 OrthoFinder output from all 47 species
Cre06.g278159 ATCOL5, COL5 Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Cre12.g534100 COL2, ATCOL2 No description available 0.01 OrthoFinder output from all 47 species
Ppi_g18187 ATCOL4, COL4 floral promoter *(CONSTANS) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g06077 No alias floral promoter *(CONSTANS) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e002319_P001 ATCOL4, COL4,... Transcription factor GHD7 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000315 Znf_B-box 1 44
IPR010402 CCT_domain 247 289
No external refs found!