Solyc01g096070.3.1 (Solyc01g096070.3)


Aliases : Solyc01g096070.3

Description : 27.3.4 RNA.regulation of transcription.ARF, Auxin Response Factor family Encodes auxin response factor 9 (ARF9). auxin response factor 9 (ARF9)


Gene families : OG_01_0000037 (Gene family) Phylogenetic Tree(s): OG0000037_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc01g096070.3.1
Cluster HCCA cluster: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
AT1G34170 ARF13 AUXIN RESPONSE FACTOR 13 0.03 Gene family
AT1G34310 ARF12 auxin response factor 12 0.03 Gene family
AT1G34410 ARF21 auxin response factor 21 0.03 Gene family
AT1G35520 ARF15 auxin response factor 15 0.03 Gene family
AT2G28350 ARF10 auxin response factor 10 0.02 Gene family
AT2G33860 ARF3, ETT Transcriptional factor B3 family protein /... 0.03 Gene family
AT4G23980 ARF9 auxin response factor 9 0.05 Gene family
AT5G37020 ARF8, ATARF8 auxin response factor 8 0.02 Gene family
GSVIVT01011008001 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
GSVIVT01035204001 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
Solyc07g042260.3.1 Solyc07g042260.3 No description available 0.02 Gene family
Zm00001d014013 GRMZM2G159399 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.05 Gene family
Zm00001d015243 GRMZM2G102845 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.05 Gene family
Zm00001d016838 GRMZM2G702026 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
Zm00001d026540 GRMZM2G086949 No description available 0.03 Gene family
Zm00001d026590 GRMZM2G475882 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.05 Gene family
Zm00001d031064 GRMZM2G081158 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
Zm00001d032683 GRMZM2G153233 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
Zm00001d036593 GRMZM2G089640 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.04 Gene family
Zm00001d038698 GRMZM2G441325 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.06 Gene family
Zm00001d041497 GRMZM2G073750 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
Zm00001d052637 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR033389 AUX/IAA_dom 551 660
IPR010525 Auxin_resp 237 316
IPR003340 B3_DNA-bd 111 211
No external refs found!