Aspi01Gene30602.t1 (Aspi01Gene30602)

Aliases : Aspi01Gene30602

Description : pectin methylesterase & original description: none

Gene families : OG0000083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene30602.t1
Cluster	HCCA: Cluster_40

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00007p00264370	evm_27.TU.AmTr_v1...	Cell wall.pectin.homogalacturonan.modification and...	0.03	OrthoFinder output from all 47 species
AMTR_s00027p00247950	evm_27.TU.AmTr_v1...	Cell wall.pectin.homogalacturonan.modification and...	0.04	OrthoFinder output from all 47 species
AMTR_s00106p00092510	evm_27.TU.AmTr_v1...	Cell wall.pectin.homogalacturonan.modification and...	0.02	OrthoFinder output from all 47 species
AT2G36710	No alias	Pectin lyase-like superfamily protein	0.04	OrthoFinder output from all 47 species
AT5G19730	No alias	Pectin lyase-like superfamily protein	0.03	OrthoFinder output from all 47 species
AT5G26810	No alias	Pectin lyase-like superfamily protein	0.03	OrthoFinder output from all 47 species
Aev_g10289	No alias	pectin methylesterase & original description: none	0.04	OrthoFinder output from all 47 species
Aev_g10719	No alias	pectin methylesterase & original description: none	0.04	OrthoFinder output from all 47 species
Aev_g10720	No alias	pectin methylesterase & original description: none	0.04	OrthoFinder output from all 47 species
Aev_g18114	No alias	pectin methylesterase & original description: none	0.04	OrthoFinder output from all 47 species
Aev_g18531	No alias	pectin methylesterase & original description: none	0.04	OrthoFinder output from all 47 species
Aev_g41068	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g16993	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g25187	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Als_g12101	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g04970	No alias	pectin methylesterase & original description: none	0.05	OrthoFinder output from all 47 species
Aob_g06410	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g22635	No alias	pectin methylesterase & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g02507	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g07992	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g20106	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aop_g20602	No alias	pectin methylesterase & original description: none	0.05	OrthoFinder output from all 47 species
Aop_g21986	No alias	pectin methylesterase & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene05718.t1	Aspi01Gene05718	pectin methylesterase & original description: none	0.11	OrthoFinder output from all 47 species
Aspi01Gene07316.t2	VGDH1, Aspi01Gene07316	pectin methylesterase & original description: none	0.06	OrthoFinder output from all 47 species
Aspi01Gene10492.t1	Aspi01Gene10492	pectin methylesterase & original description: none	0.12	OrthoFinder output from all 47 species
Aspi01Gene11134.t1	Aspi01Gene11134	pectin methylesterase & original description: none	0.06	OrthoFinder output from all 47 species
Aspi01Gene31942.t1	Aspi01Gene31942	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene59341.t1	Aspi01Gene59341	pectin methylesterase & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene59345.t1	Aspi01Gene59345	pectin methylesterase & original description: none	0.09	OrthoFinder output from all 47 species
Aspi01Gene59347.t1	Aspi01Gene59347	pectin methylesterase & original description: none	0.06	OrthoFinder output from all 47 species
Aspi01Gene70538.t1	Aspi01Gene70538	pectin methylesterase & original description: none	0.06	OrthoFinder output from all 47 species
Azfi_s0103.g044651	No alias	pectin methylesterase & original description: CDS=1-1083	0.03	OrthoFinder output from all 47 species
Azfi_s0108.g045229	No alias	pectin methylesterase & original description: CDS=1-615	0.01	OrthoFinder output from all 47 species
Ceric.03G008900.1	Ceric.03G008900	pectin methylesterase & original description:...	0.05	OrthoFinder output from all 47 species
Ceric.10G069000.1	Ceric.10G069000	pectin methylesterase & original description:...	0.01	OrthoFinder output from all 47 species
Ceric.10G071300.1	Ceric.10G071300	pectin methylesterase & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.10G076400.1	Ceric.10G076400	pectin methylesterase & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.13G037100.1	Ceric.13G037100	not classified & original description: pacid=50635930...	0.02	OrthoFinder output from all 47 species
Ceric.1Z107000.1	Ceric.1Z107000	pectin methylesterase & original description:...	0.02	OrthoFinder output from all 47 species
Ceric.29G054600.1	Ceric.29G054600	pectin methylesterase & original description:...	0.06	OrthoFinder output from all 47 species
Ceric.37G019400.1	Ceric.37G019400	pectin methylesterase & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g16825	No alias	pectin methylesterase & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g06266	No alias	pectin methylesterase & original description: none	0.05	OrthoFinder output from all 47 species
Dcu_g11350	No alias	pectin methylesterase & original description: none	0.05	OrthoFinder output from all 47 species
Dcu_g11729	No alias	pectin methylesterase & original description: none	0.05	OrthoFinder output from all 47 species
Dcu_g44261	No alias	pectin methylesterase & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g13696	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g25225	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g27753	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g09538	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g26229	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01009729001	ATPE11, PE11	Cell wall.pectin.homogalacturonan.modification and...	0.02	OrthoFinder output from all 47 species
GSVIVT01023786001	ATPE11, PE11	Cell wall.pectin.homogalacturonan.modification and...	0.03	OrthoFinder output from all 47 species
GSVIVT01031250001	No alias	Cell wall.pectin.homogalacturonan.modification and...	0.05	OrthoFinder output from all 47 species
LOC_Os01g19440.1	LOC_Os01g19440	pectin methylesterase	0.04	OrthoFinder output from all 47 species
LOC_Os05g44600.1	LOC_Os05g44600	pectin methylesterase	0.03	OrthoFinder output from all 47 species
LOC_Os07g46190.1	LOC_Os07g46190	pectin methylesterase	0.02	OrthoFinder output from all 47 species
Len_g02282	No alias	pectin methylesterase & original description: none	0.04	OrthoFinder output from all 47 species
Lfl_g40175	No alias	pectin methylesterase & original description: none	0.04	OrthoFinder output from all 47 species
MA_10428610g0010	No alias	pectin methylesterase	0.05	OrthoFinder output from all 47 species
MA_14449g0010	No alias	pectin methylesterase	0.04	OrthoFinder output from all 47 species
MA_19196g0010	ATPE11, PE11	pectin methylesterase	0.04	OrthoFinder output from all 47 species
MA_20853g0010	No alias	pectin methylesterase	0.02	OrthoFinder output from all 47 species
MA_304854g0010	ATPE11, PE11	pectin methylesterase	0.03	OrthoFinder output from all 47 species
Mp2g01420.1	No alias	pectin methylesterase	0.02	OrthoFinder output from all 47 species
Mp5g03920.1	No alias	pectin methylesterase	0.03	OrthoFinder output from all 47 species
Mp5g03930.1	No alias	pectin methylesterase	0.03	OrthoFinder output from all 47 species
Msp_g06289	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g39582	No alias	pectin methylesterase & original description: none	0.05	OrthoFinder output from all 47 species
Msp_g42451	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g44845	No alias	pectin methylesterase & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g03614	No alias	pectin methylesterase & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g27443	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g25737	No alias	pectin methylesterase & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g30829	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g32792	No alias	pectin methylesterase & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g01612	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g10459	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g11138	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g24799	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g29894	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g61465	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g63851	No alias	pectin methylesterase & original description: none	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010091	No alias	pectin methylesterase & original description: CDS=1-882	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0066.g016099	No alias	pectin methylesterase & original description: CDS=1-1224	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0104.g020122	No alias	not classified & original description: CDS=269-877	0.03	OrthoFinder output from all 47 species
Sam_g12543	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g16125	No alias	EC_3.1 hydrolase acting on ester bond & original...	0.04	OrthoFinder output from all 47 species
Sam_g25180	No alias	EC_3.1 hydrolase acting on ester bond & original...	0.02	OrthoFinder output from all 47 species
Sam_g38210	No alias	EC_3.1 hydrolase acting on ester bond & original...	0.03	OrthoFinder output from all 47 species
Smo76951	No alias	Cell wall.pectin.homogalacturonan.modification and...	0.02	OrthoFinder output from all 47 species
Smo81583	No alias	Cell wall.pectin.homogalacturonan.modification and...	0.03	OrthoFinder output from all 47 species
Solyc01g079180.4.1	Solyc01g079180	pectin methylesterase	0.03	OrthoFinder output from all 47 species
Solyc01g109740.3.1	ATPE11, PE11,...	pectin methylesterase	0.04	OrthoFinder output from all 47 species
Solyc02g075620.4.1	Solyc02g075620	pectin methylesterase	0.03	OrthoFinder output from all 47 species
Solyc07g043240.4.1	Solyc07g043240	pectin methylesterase	0.03	OrthoFinder output from all 47 species
Spa_g00755	No alias	pectin methylesterase & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g03685	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g10100	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g11483	No alias	pectin methylesterase & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g41355	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g01655	No alias	pecTin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g15602	No alias	pecTin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g36990	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g36991	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e029074_P001	Zm00001e029074	pectin methylesterase	0.01	OrthoFinder output from all 47 species
Zm00001e035522_P001	QRT1, Zm00001e035522	pectin methylesterase	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0030599	pectinesterase activity	IEA	Interproscan
BP	GO:0042545	cell wall modification	IEA	Interproscan
BP	GO:0045229	external encapsulating structure organization	None	Extended
MF	GO:0052689	carboxylic ester hydrolase activity	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000070	Pectinesterase_cat	94	379

External Links

No external refs found!

Aspi01Gene30602.t1 (Aspi01Gene30602)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation