Solyc01g095890.3.1 (Solyc01g095890.3)


Aliases : Solyc01g095890.3

Description : 27.3.69 RNA.regulation of transcription.SET-domain transcriptional regulator family SET domain protein 16 (SDG16)


Gene families : OG_01_0000544 (Gene family) Phylogenetic Tree(s): OG0000544_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc01g095890.3.1
Cluster HCCA cluster: Cluster_270

Target Alias Description ECC score Gene Family Method Actions
AT5G42400 SDG25, ATXR7 SET domain protein 25 0.03 Gene family
AT5G53430 SET29, SDG29, ATX5 SET domain group 29 0.04 Gene family
GSVIVT01027118001 No alias 27.3.69 RNA.regulation of transcription.SET-domain... 0.05 Gene family
LOC_Os12g41900 Os12g0613200 27.3.69 RNA.regulation of transcription.SET-domain... 0.03 Gene family
Zm00001d008941 GRMZM2G372928 27.3.69 RNA.regulation of transcription.SET-domain... 0.03 Gene family
Zm00001d023333 GRMZM2G473138 27.3.69 RNA.regulation of transcription.SET-domain... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 436 488
IPR000313 PWWP_dom 246 344
IPR001214 SET_dom 923 1028
No external refs found!