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  5. Aspi01Gene30517.t1

Aspi01Gene30517.t1 (CRR22, Aspi01Gene30517)


Aliases : CRR22, Aspi01Gene30517

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene30517.t1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00097640 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g39530... 0.02 OrthoFinder output from all 47 species
AMTR_s00103p00160020 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein DOT4,... 0.02 OrthoFinder output from all 47 species
Ala_g17191 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g17656 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g47303 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55197 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37552 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g20705 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23402 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g38061 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g39230 OTP84 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g70075 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0004.g008403 EMB2758 not classified & original description: CDS=1-1560 0.03 OrthoFinder output from all 47 species
Azfi_s0008.g011342 No alias not classified & original description: CDS=1-1953 0.03 OrthoFinder output from all 47 species
Azfi_s0010.g012398 No alias not classified & original description: CDS=1-3681 0.03 OrthoFinder output from all 47 species
Azfi_s0175.g055975 No alias not classified & original description: CDS=1-4965 0.03 OrthoFinder output from all 47 species
Azfi_s0245.g060017 No alias not classified & original description: CDS=1-2076 0.01 OrthoFinder output from all 47 species
Azfi_s0349.g066524 No alias ssDNA-binding protein *(OSB) & original description: CDS=117-392 0.03 OrthoFinder output from all 47 species
Azfi_s1334.g101644 No alias not classified & original description: CDS=1-3543 0.01 OrthoFinder output from all 47 species
Azfi_s4317.g118724 No alias not classified & original description: CDS=1-465 0.01 OrthoFinder output from all 47 species
Cba_g03394 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g06588 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g31665 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g56780 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75354 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G053600.1 Ceric.01G053600 not classified & original description: pacid=50592089... 0.03 OrthoFinder output from all 47 species
Ceric.07G042200.1 Ceric.07G042200 not classified & original description: pacid=50626031... 0.01 OrthoFinder output from all 47 species
Dac_g19091 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g22650 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g28151 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g35851 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g11021 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g17197 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g17233 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g05845 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g06719 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g19684 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g19712 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21670 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22016 OTP86 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22326 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22598 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17034 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g38580.1 EMB2261, LOC_Os03g38580 Pentatricopeptide repeat-containing protein At3g24000,... 0.01 OrthoFinder output from all 47 species
LOC_Os06g08660.1 LOC_Os06g08660 Pentatricopeptide repeat-containing protein At4g30700... 0.01 OrthoFinder output from all 47 species
Len_g17789 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g17636 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g27766 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g03763 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g13253 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g22779 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g33818 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g41395 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g46020 MEF22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g46446 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g25474 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g27949 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g27959 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g12341 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g23510 CRR22 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g33905 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g02551 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g05441 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g07329 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12221 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12352 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13014 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13547 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57347 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57955 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57998 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63187 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63660 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g07598 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04681 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18936 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29054 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30227 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30507 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g39236 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57818 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002433 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003613 No alias not classified & original description: CDS=279-3914 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004484 No alias not classified & original description: CDS=1-2304 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007167 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-3162 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0065.g016059 No alias not classified & original description: CDS=25-3486 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017091 No alias not classified & original description: CDS=1-3111 0.03 OrthoFinder output from all 47 species
Sam_g16320 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17989 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g18597 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24509 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24796 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29373 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29927 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g33599 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g36269 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g37190 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g48011 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g50534 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g51779 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g52092 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo105356 No alias Pentatricopeptide repeat-containing protein At3g63370,... 0.02 OrthoFinder output from all 47 species
Smo83339 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.02 OrthoFinder output from all 47 species
Solyc03g114660.1.1 Solyc03g114660 Pentatricopeptide repeat-containing protein At1g18485... 0.03 OrthoFinder output from all 47 species
Solyc04g016540.2.1 Solyc04g016540 Pentatricopeptide repeat-containing protein At2g39620... 0.01 OrthoFinder output from all 47 species
Spa_g00965 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g23956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29657 No alias ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g44841 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g45601 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g47727 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g17584 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e014549_P001 CRR22, Zm00001e014549 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Zm00001e025897_P001 Zm00001e025897 Putative pentatricopeptide repeat-containing protein... 0.01 OrthoFinder output from all 47 species
Zm00001e026664_P002 Zm00001e026664 RNA editing factor (BLX) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 283 330
IPR002885 Pentatricopeptide_repeat 182 230
IPR002885 Pentatricopeptide_repeat 485 532
IPR002885 Pentatricopeptide_repeat 384 432
IPR002885 Pentatricopeptide_repeat 561 584
No external refs found!