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  5. Aspi01Gene29933.t2

Aspi01Gene29933.t2 (Aspi01Gene29933)


Aliases : Aspi01Gene29933

Description : not classified & original description: none


Gene families : OG0000185 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000185_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene29933.t2
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
AT5G46190 No alias RNA-binding KH domain-containing protein 0.03 OrthoFinder output from all 47 species
Adi_g085503 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g11675 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.03 OrthoFinder output from all 47 species
Als_g16566 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.03 OrthoFinder output from all 47 species
Als_g61202 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.03 OrthoFinder output from all 47 species
Aob_g15784 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06665 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g12024 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g22559 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02923 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.03 OrthoFinder output from all 47 species
Dde_g08862 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.03 OrthoFinder output from all 47 species
Ehy_g03943 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g06976 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.04 OrthoFinder output from all 47 species
Msp_g10485 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g04462 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g00630 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.03 OrthoFinder output from all 47 species
Pir_g10345 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.04 OrthoFinder output from all 47 species
Ppi_g01260 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.03 OrthoFinder output from all 47 species
Ppi_g12960 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo73985 No alias RNA-binding KH domain-containing protein RCF3... 0.03 OrthoFinder output from all 47 species
Spa_g53383 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 370 421
IPR004088 KH_dom_type_1 216 255
IPR004088 KH_dom_type_1 633 696
IPR004088 KH_dom_type_1 454 522
IPR004088 KH_dom_type_1 52 104
No external refs found!