Aliases : LSH4, Aspi01Gene29667
Description : plant-specific ALOG-type transcription factor & original description: none
Gene families : OG0001118 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001118_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Aspi01Gene29667.t1 | |
Cluster | HCCA: Cluster_38 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT2G42610 | LSH10 | Protein of unknown function (DUF640) | 0.02 | OrthoFinder output from all 47 species | |
AT4G18610 | LSH9 | Protein of unknown function (DUF640) | 0.04 | OrthoFinder output from all 47 species | |
Adi_g024284 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.05 | OrthoFinder output from all 47 species | |
Als_g17249 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Aop_g21143 | LSH6 | plant-specific ALOG-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0048.g030438 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.02G086500.1 | LSH4, Ceric.02G086500 | plant-specific ALOG-type transcription factor & original... | 0.05 | OrthoFinder output from all 47 species | |
Ceric.22G071900.1 | LSH6, Ceric.22G071900 | plant-specific ALOG-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Dde_g22007 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01021215001 | LSH10 | Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os07g04670.1 | LSH6, LOC_Os07g04670 | Protein G1 OS=Oryza sativa subsp. japonica... | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g02008 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.05 | OrthoFinder output from all 47 species | |
Nbi_g04394 | LSH6 | plant-specific ALOG-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g26624 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
Pir_g10661 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Pir_g20213 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.07 | OrthoFinder output from all 47 species | |
Pnu_g12268 | LSH6 | plant-specific ALOG-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g02051 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g32132 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.07 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0001.g000386 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Solyc10g007310.1.1 | LSH10, Solyc10g007310 | Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10... | 0.04 | OrthoFinder output from all 47 species | |
Spa_g04648 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
Spa_g07735 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g22416 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g22798 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g47479 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Tin_g06794 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e016177_P002 | LSH4, Zm00001e016177 | Protein G1-like6 OS=Oryza sativa subsp. indica... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e032784_P001 | LSH6, Zm00001e032784 | Protein G1 OS=Oryza sativa subsp. japonica... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e037775_P001 | LSH4, Zm00001e037775 | Protein G1-like2 OS=Oryza sativa subsp. indica... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR006936 | ALOG_dom | 77 | 194 |
No external refs found! |