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  5. Aspi01Gene29143.t1

Aspi01Gene29143.t1 (FMA, Aspi01Gene29143)


Aliases : FMA, Aspi01Gene29143

Description : bHLH-type transcription factor & original description: none


Gene families : OG0000768 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000768_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene29143.t1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00198780 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.04 OrthoFinder output from all 47 species
AMTR_s00015p00239460 SPCH,... RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
AMTR_s00089p00043950 FMA,... RNA biosynthesis.transcriptional activation.bHLH... 0.05 OrthoFinder output from all 47 species
AT2G46810 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G61950 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G46690 bHLH071 beta HLH protein 71 0.02 OrthoFinder output from all 47 species
AT5G65320 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
Aev_g10535 FMA bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g10924 FMA bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g10378 FMA bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene38670.t1 FMA, Aspi01Gene38670 bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g07566 FMA bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.17G023000.1 FMA, Ceric.17G023000 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.23G002400.1 FMA, Ceric.23G002400 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g22750 FMA bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17824 FMA bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g42964 FMA bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g30290 FMA bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01021074001 FMA RNA biosynthesis.transcriptional activation.bHLH... 0.04 OrthoFinder output from all 47 species
GSVIVT01027446001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
Gb_01096 FMA transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Gb_21105 FMA transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Gb_34544 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os05g50900.1 FMA, LOC_Os05g50900 transcription factor (bHLH) 0.06 OrthoFinder output from all 47 species
LOC_Os05g51820.1 MUTE, LOC_Os05g51820 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os08g37730.1 LOC_Os08g37730 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os09g29360.1 LOC_Os09g29360 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_141469g0010 FMA transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
Nbi_g10985 FMA bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g11060 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g15543 FMA bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g38431 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g50516 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g66099 FMA bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63342 FMA not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g63346 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g07999 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g098720.3.1 Solyc01g098720 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Solyc05g053660.3.1 FMA, Solyc05g053660 transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
Zm00001e026643_P001 FMA, Zm00001e026643 transcription factor (bHLH) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011598 bHLH_dom 300 351
No external refs found!