1. Home
  2. Species
  3. Alsophila spinulosa
  4. Sequence
  5. Aspi01Gene28614.t2

Aspi01Gene28614.t2 (PAP(IV), nPAP, Aspi01Gene28614)


Aliases : PAP(IV), nPAP, Aspi01Gene28614

Description : poly(A) RNA polymerase & original description: none


Gene families : OG0000731 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000731_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene28614.t2
Cluster HCCA: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
AT2G25850 PAPS2 poly(A) polymerase 2 0.03 OrthoFinder output from all 47 species
Aev_g30704 PAP(IV), nPAP poly(A) RNA polymerase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene26458.t1 PAPS2, Aspi01Gene26458 poly(A) RNA polymerase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26459.t1 PAPS2, Aspi01Gene26459 poly(A) RNA polymerase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26460.t1 PAPS2, Aspi01Gene26460 poly(A) RNA polymerase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26461.t1 PAPS2, Aspi01Gene26461 poly(A) RNA polymerase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26465.t1 PAPS2, Aspi01Gene26465 poly(A) RNA polymerase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene26466.t1 PAPS2, Aspi01Gene26466 poly(A) RNA polymerase & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene26467.t1 PAPS2, Aspi01Gene26467 poly(A) RNA polymerase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26469.t1 PAPS2, Aspi01Gene26469 poly(A) RNA polymerase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26472.t1 PAPS2, Aspi01Gene26472 poly(A) RNA polymerase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26483.t1 PAPS2, Aspi01Gene26483 poly(A) RNA polymerase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene26491.t1 PAPS2, Aspi01Gene26491 poly(A) RNA polymerase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26492.t1 PAPS2, Aspi01Gene26492 poly(A) RNA polymerase & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g62706 PAP(IV), nPAP poly(A) RNA polymerase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.05G071900.1 PAP(IV), nPAP,... poly(A) RNA polymerase & original description:... 0.06 OrthoFinder output from all 47 species
Ehy_g04683 PAPS1 poly(A) RNA polymerase & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g27060 No alias poly(A) RNA polymerase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g066200.3.1 PAP(IV), nPAP,... poly(A) RNA polymerase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0004652 polynucleotide adenylyltransferase activity IEA Interproscan
MF GO:0016779 nucleotidyltransferase activity IEA Interproscan
BP GO:0043631 RNA polyadenylation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002934 Polymerase_NTP_transf_dom 128 210
IPR007010 PolA_pol_RNA-bd_dom 403 444
IPR007010 PolA_pol_RNA-bd_dom 462 532
IPR007012 PolA_pol_cen_dom 57 399
No external refs found!