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  5. Aspi01Gene28463.t1

Aspi01Gene28463.t1 (AGO1, Aspi01Gene28463)


Aliases : AGO1, Aspi01Gene28463

Description : regulatory protein *(AGO7) of transacting siRNA pathway & original description: none


Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene28463.t1
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00069070 AGO7, ZIP,... Chromatin organisation.DNA methylation.canonical... 0.04 OrthoFinder output from all 47 species
AMTR_s00083p00065730 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G31290 AGO3 ARGONAUTE 3 0.02 OrthoFinder output from all 47 species
Adi_g013023 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.03 OrthoFinder output from all 47 species
Ala_g34221 AGO4, OCP11 siRNA-integrating factor *(AGO) & original description: none 0.01 OrthoFinder output from all 47 species
Als_g60456 AGO7, ZIP not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g11125 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.02 OrthoFinder output from all 47 species
Aob_g22649 AGO7, ZIP not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10666 AGO1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene61220.t1 AGO1, Aspi01Gene61220 not classified & original description: none 0.06 OrthoFinder output from all 47 species
ChrSy.fgenesh.mRNA.6 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Dac_g05113 AGO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g07779 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
Dcu_g16878 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g44557 AGO1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01001941001 AGO4, OCP11 Chromatin organisation.DNA methylation.canonical... 0.03 OrthoFinder output from all 47 species
GSVIVT01012490001 AGO7, ZIP Protein argonaute 7 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01033726001 AGO5 Chromatin organisation.DNA methylation.canonical... 0.03 OrthoFinder output from all 47 species
LOC_Os02g40320.1 PNH, AGO10, ZLL,... Protein argonaute MEL1 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os03g47830.1 AGO5, LOC_Os03g47830 Protein argonaute 11 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os06g51310.2 AGO1, LOC_Os06g51310 RIS-Complex miRNA recruiting factor (AGO1) 0.03 OrthoFinder output from all 47 species
Len_g24514 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
MA_594g0010 PNH, AGO10, ZLL Protein argonaute PNH1 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Mp8g08610.1 AGO4, OCP11 siRNA-integrating factor (AGO) 0.02 OrthoFinder output from all 47 species
Ore_g16802 AGO5 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c17_350V3.1 AGO1, Pp3c17_350 Stabilizer of iron transporter SufD / Polynucleotidyl transferase 0.03 OrthoFinder output from all 47 species
Solyc06g073530.3.1 AGO4, OCP11,... siRNA-integrating factor (AGO) 0.02 OrthoFinder output from all 47 species
Solyc09g082830.4.1 PNH, AGO10, ZLL,... RIS-Complex miRNA recruiting factor (AGO1) 0.05 OrthoFinder output from all 47 species
Spa_g57163 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.01 OrthoFinder output from all 47 species
Tin_g08802 AGO1 regulatory protein *(AGO7) of transacTing siRNA pathway... 0.03 OrthoFinder output from all 47 species
Zm00001e030606_P001 PNH, AGO10, ZLL,... RIS-Complex miRNA recruiting factor (AGO1) 0.02 OrthoFinder output from all 47 species
Zm00001e036986_P001 AGO1, Zm00001e036986 Protein argonaute 1B OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032474 Argonaute_N 517 643
IPR014811 ArgoL1 653 701
IPR003100 PAZ_dom 722 829
IPR003165 Piwi 999 1309
IPR032472 ArgoL2 840 886
No external refs found!