Aspi01Gene28299.t1 (Aspi01Gene28299)

Aliases : Aspi01Gene28299

Description : subfamily ABCB transporter & original description: none

Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene28299.t1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00045p00109940	PGP11,...	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
AMTR_s00076p00195870	PGP1, ABCB1,...	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
AT4G18050	PGP9	P-glycoprotein 9	0.03	OrthoFinder output from all 47 species
AT5G46540	PGP7	P-glycoprotein 7	0.05	OrthoFinder output from all 47 species
Adi_g029160	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g058585	ABCB19,...	subfamily ABCB transporter & original description: none	0.05	OrthoFinder output from all 47 species
Adi_g087129	No alias	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g16048	ABCB19,...	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g21203	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g26174	No alias	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g29011	PGP10	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Als_g05763	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Als_g18811	PGP11	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Als_g22635	ABCB19,...	subfamily ABCB transporter & original description: none	0.05	OrthoFinder output from all 47 species
Aob_g18500	ABCB19,...	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g38133	No alias	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene08455.t1	PGP11, Aspi01Gene08455	subfamily ABCB transporter & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene12320.t2	PGP2, Aspi01Gene12320	subfamily ABCB transporter & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene62054.t1	ABCB19,...	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Dac_g14063	PGP11	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Dac_g35671	ABCB19,...	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dac_g38327	PGP9	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Dac_g39907	No alias	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g26046	PGP1, ABCB1, ATPGP1	subfamily ABCB transporter & original description: none	0.05	OrthoFinder output from all 47 species
Dcu_g33169	ABCB19,...	subfamily ABCB transporter & original description: none	0.06	OrthoFinder output from all 47 species
Dde_g28161	PGP11	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g52100	ABCB19,...	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g21294	ABCB19,...	subfamily ABCB transporter & original description: none	0.05	OrthoFinder output from all 47 species
GSVIVT01009946001	ABCB14, ATABCB14, PGP14	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
GSVIVT01013125001	PGP2	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
GSVIVT01028256001	PGP11	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
Gb_02468	No alias	subfamily ABCB transporter	0.05	OrthoFinder output from all 47 species
Gb_02469	No alias	subfamily ABCB transporter	0.05	OrthoFinder output from all 47 species
Gb_07563	ABCB19,...	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Gb_10211	No alias	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Gb_10215	No alias	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Gb_32125	PGP11	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Gb_33057	ABCB19,...	subfamily ABCB transporter	0.04	OrthoFinder output from all 47 species
Gb_33058	ABCB19,...	subfamily ABCB transporter	0.04	OrthoFinder output from all 47 species
Gb_36862	PGP21	subfamily ABCB transporter	0.06	OrthoFinder output from all 47 species
LOC_Os01g18670.1	PGP21, LOC_Os01g18670	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
LOC_Os01g50100.1	PGP11, LOC_Os01g50100	subfamily ABCB transporter	0.05	OrthoFinder output from all 47 species
LOC_Os01g50160.1	PGP11, LOC_Os01g50160	subfamily ABCB transporter	0.05	OrthoFinder output from all 47 species
LOC_Os02g09720.1	LOC_Os02g09720	subfamily ABCB transporter	0.06	OrthoFinder output from all 47 species
LOC_Os02g46680.1	PGP2, LOC_Os02g46680	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Lfl_g08040	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g10739	ABCB19,...	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Lfl_g33330	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
MA_10134765g0010	PGP11	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_102299g0010	No alias	Putative multidrug resistance protein OS=Oryza sativa...	0.02	OrthoFinder output from all 47 species
MA_10432169g0010	PGP11	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
MA_10432922g0010	No alias	subfamily ABCB transporter	0.04	OrthoFinder output from all 47 species
MA_1824g0010	No alias	Putative multidrug resistance protein OS=Oryza sativa...	0.03	OrthoFinder output from all 47 species
MA_18863g0020	PGP3, MDR3	ABC transporter B family member 3 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_636449g0010	No alias	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
MA_6870g0010	No alias	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
MA_6958g0010	PGP21	ABC transporter B family member 21 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
MA_79399g0010	No alias	Putative multidrug resistance protein OS=Oryza sativa...	0.02	OrthoFinder output from all 47 species
MA_82945g0030	PGP17	ABC transporter B family member 17 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_83806g0010	No alias	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
MA_9253g0010	No alias	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
MA_934204g0010	No alias	subfamily ABCB transporter	0.04	OrthoFinder output from all 47 species
MA_9589971g0010	PGP10	ABC transporter B family member 10 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Mp2g11920.1	ABCB19,...	subfamily ABCB transporter	0.04	OrthoFinder output from all 47 species
Mp3g11830.1	ABCB19,...	auxin efflux transporter (ABCB19). subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Mp7g04390.1	ATPGP4, PGP4, ABCB4, MDR4	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Mpzg01120.1	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Msp_g17749	ABCB19,...	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Msp_g36979	ABCB19,...	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g02494	PGP2	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g19207	ABCB19,...	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g29606	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g30543	PGP18	subfamily ABCB transporter & original description: none	0.06	OrthoFinder output from all 47 species
Ore_g33236	ABCB19,...	ABC-B-type transporter *(AMN3) & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g35743	No alias	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g38163	PGP1, ABCB1, ATPGP1	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g26459	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g64430	PGP11	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g65660	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g19681	PGP2	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Pp3c17_16450V3.1	ABCB19,...	ATP binding cassette subfamily B19	0.02	OrthoFinder output from all 47 species
Ppi_g13619	No alias	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0054.g014291	PGP2	subfamily ABCB transporter & original description: CDS=1-4248	0.05	OrthoFinder output from all 47 species
Sam_g03287	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g48720	No alias	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Smo408755	No alias	Solute transport.primary active transport.ABC...	0.06	OrthoFinder output from all 47 species
Smo92485	ABCB19,...	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Solyc03g005860.4.1	PGP11, Solyc03g005860	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Solyc06g009290.4.1	PGP21, Solyc06g009290	subfamily ABCB transporter	0.06	OrthoFinder output from all 47 species
Spa_g20575	ABCB19,...	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g06701	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g08424	PGP11	subfamily ABCB transporter & original description: none	0.05	OrthoFinder output from all 47 species
Tin_g38947	ABCB19,...	subfamily ABCB transporter & original description: none	0.06	OrthoFinder output from all 47 species
Tin_g41085	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g46427	ATPGP4, PGP4, ABCB4, MDR4	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e014797_P002	Zm00001e014797	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Zm00001e017444_P002	PGP21, Zm00001e017444	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Zm00001e020073_P001	ATPGP4, PGP4,...	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Zm00001e025063_P001	Zm00001e025063	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140359	ABC-type transporter activity	IEA	Interproscan
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	1109	1257
IPR011527	ABC1_TM_dom	132	407
IPR011527	ABC1_TM_dom	769	1038
IPR003439	ABC_transporter-like_ATP-bd	479	627

External Links

No external refs found!

Aspi01Gene28299.t1 (Aspi01Gene28299)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation