1. Home
  2. Species
  3. Alsophila spinulosa
  4. Sequence
  5. Aspi01Gene28294.t1

Aspi01Gene28294.t1 (Aspi01Gene28294)


Aliases : Aspi01Gene28294

Description : scaffold component *(NOT1) of mRNA deadenylation CCR4-NOT complex & original description: none


Gene families : OG0002046 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002046_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene28294.t1

Target Alias Description ECC score Gene Family Method Actions
Aob_g22134 No alias scaffold component *(NOT1) of mRNA deadenylation... 0.03 OrthoFinder output from all 47 species
Ceric.34G056500.1 Ceric.34G056500 scaffold component *(NOT1) of mRNA deadenylation... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000767.19 No alias RNA processing.RNA decay.deadenylation-dependent... 0.01 OrthoFinder output from all 47 species
GSVIVT01018721001 No alias RNA processing.RNA decay.deadenylation-dependent... 0.03 OrthoFinder output from all 47 species
MA_42843g0010 No alias component NOT1 of mRNA deadenylation CCR4-NOT complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007196 CCR4-Not_Not1_C 2085 2453
IPR032193 CNOT1_TTP_bind 667 830
IPR032194 CNOT1_HEAT 481 629
IPR032191 CNOT1_CAF1_bind 992 1211
IPR024557 CNOT1_dom_4 1345 1486
No external refs found!