Aspi01Gene28060.t1 (ABCG40, PDR12,...)

Aliases : ABCG40, PDR12, ATABCG40, ATPDR12, Aspi01Gene28060

Description : subfamily ABCG transporter & original description: none

Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene28060.t1
Cluster	HCCA: Cluster_43

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00056p00117010	PEN3, ABCG36,...	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
AMTR_s00069p00192990	PDR11, ATPDR11,...	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
AT1G15520	ABCG40, PDR12,...	pleiotropic drug resistance 12	0.03	OrthoFinder output from all 47 species
AT2G29940	ATPDR3, PDR3	pleiotropic drug resistance 3	0.03	OrthoFinder output from all 47 species
Adi_g034248	PDR4, ATPDR4	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g055702	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g07828	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g16443	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Als_g61298	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g22545	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g30586	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g31181	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g18617	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g36836	ABCG40, PDR12,...	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g37088	PDR11, ATPDR11	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aop_g37548	ABCG40, PDR12,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g65335	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene02114.t4	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene02131.t1	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene28059.t1	ABCG40, PDR12,...	subfamily ABCG transporter & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene64035.t2	PDR6, ATPDR6,...	subfamily ABCG transporter & original description: none	0.06	OrthoFinder output from all 47 species
Azfi_s0008.g011362	PDR6, ATPDR6	subfamily ABCG transporter & original description: CDS=327-4706	0.03	OrthoFinder output from all 47 species
Cba_g72436	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.19G065500.1	PDR11, ATPDR11,...	subfamily ABCG transporter & original description:...	0.04	OrthoFinder output from all 47 species
Dde_g28400	ABCG40, PDR12,...	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01017196001	ABCG40, PDR12,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
GSVIVT01034748001	PDR11, ATPDR11	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Gb_34309	ATPDR3, PDR3	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
LOC_Os01g42410.1	ABCG40, PDR12,...	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
LOC_Os02g11760.1	ABCG40, PDR12,...	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
LOC_Os02g32690.1	PIS1, ABCG37,...	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
LOC_Os08g29570.1	ABCG40, PDR12,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Len_g47391	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g36609	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g38842	ABCG40, PDR12,...	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
MA_10348400g0010	PDR1, ATPDR1	ABC transporter G family member 29 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
MA_124091g0010	ABCG40, PDR12,...	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Pp3c2_34070V3.1	ATPDR3, PDR3, Pp3c2_34070	pleiotropic drug resistance 3	0.01	OrthoFinder output from all 47 species
Ppi_g39006	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g40989	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.05	OrthoFinder output from all 47 species
Ppi_g59241	PDR11, ATPDR11	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0071.g016875	ATPDR3, PDR3	subfamily ABCG transporter & original description: CDS=1-2793	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0107.g020342	PEN3, ABCG36,...	subfamily ABCG transporter & original description: CDS=1195-5658	0.03	OrthoFinder output from all 47 species
Sam_g29979	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Smo417266	ABCG40, PDR12,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Solyc05g018510.3.1	PDR4, ATPDR4,...	cuticular lipid exporter (PEC1). subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Solyc12g019640.2.1	ABCG40, PDR12,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Spa_g09436	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g24868	PDR11, ATPDR11	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e020667_P001	ABCG40, PDR12,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140359	ABC-type transporter activity	IEA	Interproscan
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR013581	PDR_assoc	748	814
IPR013525	ABC_2_trans	531	743
IPR013525	ABC_2_trans	1218	1430
IPR029481	ABC_trans_N	121	170
IPR043926	ABCG_dom	410	486
IPR043926	ABCG_dom	1101	1168
IPR003439	ABC_transporter-like_ATP-bd	920	1072
IPR003439	ABC_transporter-like_ATP-bd	195	377

External Links

No external refs found!

Aspi01Gene28060.t1 (ABCG40, PDR12,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation