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  5. Aspi01Gene27806.t1

Aspi01Gene27806.t1 (CRR2, Aspi01Gene27806)


Aliases : CRR2, Aspi01Gene27806

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene27806.t1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00266560 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
AMTR_s00016p00252350 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g22690... 0.01 OrthoFinder output from all 47 species
AMTR_s00022p00252600 MEF1 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
AMTR_s00057p00137550 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g36980,... 0.02 OrthoFinder output from all 47 species
AMTR_s00099p00072730 MEF21,... Pentatricopeptide repeat-containing protein At5g66520... 0.02 OrthoFinder output from all 47 species
AT2G27610 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT2G33760 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.01 OrthoFinder output from all 47 species
Adi_g004364 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g004398 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g035608 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g34145 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g11401 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14569 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g17285 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20488 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04222 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06415 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16416 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18268 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22259 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g58582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g60956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g26992 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g36669 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02020 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g02659 No alias ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g16515 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g16640 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g16780 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g17427 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g23947 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g30728 No alias ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g68030 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene01654.t1 PTAC9, OSB2,... ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene55895.t1 Aspi01Gene55895 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene70275.t1 Aspi01Gene70275 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0001.g000793 No alias not classified & original description: CDS=1-2415 0.01 OrthoFinder output from all 47 species
Azfi_s0001.g000999 No alias not classified & original description: CDS=128-2962 0.01 OrthoFinder output from all 47 species
Azfi_s0010.g012368 No alias not classified & original description: CDS=1-2025 0.03 OrthoFinder output from all 47 species
Azfi_s0027.g023504 No alias not classified & original description: CDS=132-2867 0.04 OrthoFinder output from all 47 species
Azfi_s0028.g024007 No alias not classified & original description: CDS=1-1332 0.03 OrthoFinder output from all 47 species
Azfi_s0048.g030532 No alias not classified & original description: CDS=1-2100 0.03 OrthoFinder output from all 47 species
Azfi_s0069.g036581 No alias not classified & original description: CDS=1-1653 0.01 OrthoFinder output from all 47 species
Azfi_s0092.g042995 No alias not classified & original description: CDS=1-2949 0.02 OrthoFinder output from all 47 species
Azfi_s0125.g048584 CRR22 not classified & original description: CDS=1-1611 0.01 OrthoFinder output from all 47 species
Azfi_s0251.g060294 No alias not classified & original description: CDS=1-879 0.01 OrthoFinder output from all 47 species
Azfi_s0283.g063049 OTP86 ssDNA-binding protein *(OSB) & original description: CDS=1-2283 0.03 OrthoFinder output from all 47 species
Cba_g05270 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05567 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g26795 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g29842 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g34546 No alias ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g67652 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.05G093000.1 Ceric.05G093000 not classified & original description: pacid=50577993... 0.01 OrthoFinder output from all 47 species
Ceric.20G079900.1 CRR22, Ceric.20G079900 not classified & original description: pacid=50567064... 0.03 OrthoFinder output from all 47 species
Ceric.23G075300.1 Ceric.23G075300 not classified & original description: pacid=50609898... 0.03 OrthoFinder output from all 47 species
Dac_g35222 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g35851 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g36401 OTP86 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g38857 No alias ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g45907 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g46210 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g08525 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g09826 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g12101 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g16045 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16499 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22354 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23679 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g28641 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Gb_33210 OTP84 RNA editing factor (OTP82) 0.03 OrthoFinder output from all 47 species
LOC_Os04g33840.1 LOC_Os04g33840 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
LOC_Os10g39460.2 LOC_Os10g39460 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Len_g20619 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g44856 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g02262 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07068 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07814 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33282 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10311934g0010 MEF22 Pentatricopeptide repeat-containing protein At1g15510,... 0.01 OrthoFinder output from all 47 species
Msp_g12623 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g22507 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g22637 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28692 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g47517 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g48923 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g05439 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07147 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10571 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g20199 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g21730 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g27841 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g27949 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g21816 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g23513 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27667 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33192 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33905 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g43973 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13570 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g31906 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03104 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13334 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g29583 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010845 No alias not classified & original description: CDS=1-381 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011714 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2064 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0057.g014767 OTP84 not classified & original description: CDS=399-2006 0.04 OrthoFinder output from all 47 species
Sam_g02656 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g02933 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g09699 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29238 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38015 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo136134 EMB2261 Pentatricopeptide repeat-containing protein At3g12770... 0.02 OrthoFinder output from all 47 species
Smo92008 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.03 OrthoFinder output from all 47 species
Smo95641 No alias Pentatricopeptide repeat-containing protein At2g33680... 0.02 OrthoFinder output from all 47 species
Spa_g04723 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g11331 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g26699 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g39685 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g53472 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g03804 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g07560 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12995 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21929 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g26871 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e029819_P003 CRR22, Zm00001e029819 RNA editing factor (CRR22) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 290 323
IPR032867 DYW_dom 440 532
IPR046848 E_motif 342 404
IPR002885 Pentatricopeptide_repeat 21 68
IPR002885 Pentatricopeptide_repeat 122 170
IPR002885 Pentatricopeptide_repeat 223 271
No external refs found!