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Aliases : TCP2, Aspi01Gene27741
Description : TCP-type transcription factor & original description: none
Gene families : OG0000529 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000529_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Aspi01Gene27741.t1 | |
| Cluster | HCCA: Cluster_88 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00154p00072430 | TCP13, TFPD,... | RNA biosynthesis.transcriptional activation.TCP... | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g04833 | TCP10 | TCP-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g18903 | TCP3 | TCP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g30172 | ATTCP24, TCP24 | TCP-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene55173.t1 | TCP2, Aspi01Gene55173 | TCP-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0168.g054602 | TCP3 | TCP-type transcription factor & original description: CDS=18-1559 | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g22010 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.20G025200.1 | ATTCP24, TCP24,... | TCP-type transcription factor & original description:... | 0.07 | OrthoFinder output from all 47 species | |
| Ceric.37G069500.1 | TCP2, Ceric.37G069500 | TCP-type transcription factor & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g07001 | TCP3 | TCP-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01008234001 | TCP12, BRC2 | RNA biosynthesis.transcriptional activation.TCP... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01020666001 | TCP4, MEE35 | RNA biosynthesis.transcriptional activation.TCP... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01021528001 | ATTCP24, TCP24 | RNA biosynthesis.transcriptional activation.TCP... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01036449001 | TCP1 | RNA biosynthesis.transcriptional activation.TCP... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_35810 | TCP2 | transcription factor (TCP) | 0.04 | OrthoFinder output from all 47 species | |
| Gb_38376 | TCP2 | transcription factor (TCP) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os07g05720.1 | TCP2, LOC_Os07g05720 | transcription factor (TCP) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os09g24480.1 | BRC1, ATTCP18,... | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07001 | TCP10 | TCP-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_101752g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_10426407g0020 | TCP13, TFPD, PTF1 | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
| MA_12784g0010 | ATTCP24, TCP24 | transcription factor (TCP) | 0.07 | OrthoFinder output from all 47 species | |
| MA_35349g0010 | TCP2 | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
| MA_86651g0010 | No alias | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| Msp_g48155 | TCP3 | TCP-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g10533 | ATTCP24, TCP24 | TCP-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g41668 | TCP4, MEE35 | TCP-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g05279 | TCP2 | TCP-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g26630 | TCP2 | TCP-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g089020.2.1 | TCP13, TFPD,... | transcription factor (TCP) | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e005407_P001 | TCP12, BRC2,... | transcription factor (TCP) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e009811_P001 | BRC1, ATTCP18,... | transcription factor (TCP) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e011516_P001 | TCP2, Zm00001e011516 | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e032122_P001 | TCP5, Zm00001e032122 | transcription factor (TCP) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e034097_P001 | BRC1, ATTCP18,... | transcription factor (TCP) | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR017887 | TF_TCP_subgr | 253 | 338 |
| No external refs found! |