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  5. Aspi01Gene26671.t1

Aspi01Gene26671.t1 (LOP1, TRN1, Aspi01Gene26671)


Aliases : LOP1, TRN1, Aspi01Gene26671

Description : not classified & original description: none


Gene families : OG0000350 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000350_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene26671.t1
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00138540 LOP1, TRN1,... Protein TORNADO 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Ala_g19733 LOP1, TRN1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g52462 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g00814 LOP1, TRN1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g26355 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26356 LOP1, TRN1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0049.g030702 LOP1, TRN1 not classified & original description: CDS=40-3219 0.05 OrthoFinder output from all 47 species
Ceric.18G016100.1 LOP1, TRN1,... not classified & original description: pacid=50621243... 0.05 OrthoFinder output from all 47 species
Ceric.18G016400.1 Ceric.18G016400 not classified & original description: pacid=50620952... 0.04 OrthoFinder output from all 47 species
Ceric.18G016500.1 Ceric.18G016500 not classified & original description: pacid=50621773... 0.04 OrthoFinder output from all 47 species
Dac_g07679 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g28571 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36702 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g08144 LOP1, TRN1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g09554 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g28705 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g51318 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g24007 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g34586 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g41368 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g36086 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g37194 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g39802 LOP1, TRN1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g13475 LOP1, TRN1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g21358 LOP1, TRN1 not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!