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  5. Aspi01Gene25909.t1

Aspi01Gene25909.t1 (EMB976, Aspi01Gene25909)


Aliases : EMB976, Aspi01Gene25909

Description : plastidial splicing factor *(PDM4) & original description: none


Gene families : OG0007469 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007469_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene25909.t1

Target Alias Description ECC score Gene Family Method Actions
Cba_g01274 EMB976 plastidial splicing factor *(PDM4) & original description: none 0.04 OrthoFinder output from all 47 species
Gb_06359 RARE1 Pentatricopeptide repeat-containing protein At2g13600... 0.04 OrthoFinder output from all 47 species
Ore_g41040 EMB976 plastidial splicing factor *(PDM4) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06898 EMB976 plastidial splicing factor *(PDM4) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 544 572
IPR002885 Pentatricopeptide_repeat 449 468
IPR002885 Pentatricopeptide_repeat 474 503
IPR002885 Pentatricopeptide_repeat 403 433
IPR002885 Pentatricopeptide_repeat 232 257
IPR002885 Pentatricopeptide_repeat 195 223
IPR002885 Pentatricopeptide_repeat 262 307
IPR002885 Pentatricopeptide_repeat 354 397
No external refs found!