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  5. Aspi01Gene25455.t1

Aspi01Gene25455.t1 (SWI3A, CHB1, ATSWI3A,...)


Aliases : SWI3A, CHB1, ATSWI3A, Aspi01Gene25455

Description : SMARCC component *(SWI3) of chromatin remodeling complex & original description: none


Gene families : OG0000817 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000817_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene25455.t1
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
Als_g03164 SWI3A, CHB1, ATSWI3A SMARCC component *(SWI3) of chromatin remodeling complex... 0.03 OrthoFinder output from all 47 species
Als_g19082 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g16327 CHB3, ATSWI3D SMARCC component *(SWI3) of chromatin remodeling complex... 0.03 OrthoFinder output from all 47 species
Lfl_g08793 CHB4, SWI3C, ATSWI3C SMARCC component *(SWI3) of chromatin remodeling complex... 0.04 OrthoFinder output from all 47 species
Nbi_g10605 CHB3, ATSWI3D SMARCC component *(SWI3) of chromatin remodeling complex... 0.05 OrthoFinder output from all 47 species
Ppi_g31853 CHB4, SWI3C, ATSWI3C SMARCC component *(SWI3) of chromatin remodeling complex... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006350 CHB3, ATSWI3D SMARCC component *(SWI3) of chromatin remodeling complex... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007526 SWIRM 93 176
IPR032451 SMARCC_C 557 628
IPR001005 SANT/Myb 324 366
No external refs found!