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  5. Aspi01Gene25448.t1

Aspi01Gene25448.t1 (Aspi01Gene25448)


Aliases : Aspi01Gene25448

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene25448.t1
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AT3G20730 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g004476 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g057344 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05667 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18767 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30426 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54371 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g27636 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28421 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0005.g009229 No alias not classified & original description: CDS=1-2601 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g010669 No alias not classified & original description: CDS=1-3072 0.04 OrthoFinder output from all 47 species
Azfi_s0094.g043495 No alias not classified & original description: CDS=1-2592 0.04 OrthoFinder output from all 47 species
Azfi_s1596.g104539 No alias not classified & original description: CDS=111-3779 0.02 OrthoFinder output from all 47 species
Azfi_s2068.g108965 No alias not classified & original description: CDS=97-387 0.02 OrthoFinder output from all 47 species
Cba_g05966 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.03G039400.1 Ceric.03G039400 not classified & original description: pacid=50571919... 0.02 OrthoFinder output from all 47 species
Ceric.33G052800.1 Ceric.33G052800 not classified & original description: pacid=50607149... 0.03 OrthoFinder output from all 47 species
Dac_g13728 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g33128 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g16644 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22176 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01023818001 CRR28 Pentatricopeptide repeat-containing protein At4g21065... 0.03 OrthoFinder output from all 47 species
Gb_34736 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Len_g02897 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_8319g0010 CRR2 Pentatricopeptide repeat-containing protein At3g24000,... 0.02 OrthoFinder output from all 47 species
Nbi_g10444 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g21989 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g24821 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30584 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30628 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0223.g026268 No alias not classified & original description: CDS=1-2328 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0258.g026852 No alias not classified & original description: CDS=1-954 0.03 OrthoFinder output from all 47 species
Sam_g07204 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26323 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005071_P002 OSB1, Zm00001e005071 ssDNA-binding protein (OSB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 1 40
IPR002885 Pentatricopeptide_repeat 159 207
IPR002885 Pentatricopeptide_repeat 68 92
IPR002885 Pentatricopeptide_repeat 235 259
IPR046848 E_motif 278 332
No external refs found!