Aspi01Gene24972.t1 (TIL1, POL2A, ABO4,...)

Aliases : TIL1, POL2A, ABO4, EMB2284, ESD7, EMB142, EMB529, Aspi01Gene24972

Description : catalytic component *(POL2/POLE1) of DNA polymerase epsilon complex & original description: none

Gene families : OG0005358 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005358_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene24972.t1
Cluster	HCCA: Cluster_63

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00040p00175760	TIL1, POL2A,...	Cell cycle.interphase.DNA replication.elongation.DNA...	0.03	OrthoFinder output from all 47 species
AMTR_s00040p00177210	TIL1, POL2A,...	Cell cycle.interphase.DNA replication.elongation.DNA...	0.04	OrthoFinder output from all 47 species
Adi_g107892	TIL1, POL2A,...	catalytic component *(POL2/POLE1) of DNA polymerase...	0.03	OrthoFinder output from all 47 species
Als_g16530	TIL1, POL2A,...	catalytic component *(POL2/POLE1) of DNA polymerase...	0.03	OrthoFinder output from all 47 species
Cre03.g179961	TIL1, POL2A,...	Cell cycle.interphase.DNA replication.elongation.DNA...	0.02	OrthoFinder output from all 47 species
Dcu_g42121	TIL1, POL2A,...	catalytic component *(POL2/POLE1) of DNA polymerase...	0.04	OrthoFinder output from all 47 species
MA_80165g0010	TIL1, POL2A,...	catalytic component POL2/POLE1 of DNA polymerase epsilon complex	0.05	OrthoFinder output from all 47 species
MA_88369g0010	TIL1, POL2A,...	catalytic component POL2/POLE1 of DNA polymerase epsilon complex	0.03	OrthoFinder output from all 47 species
Nbi_g08627	TIL1, POL2A,...	catalytic component *(POL2/POLE1) of DNA polymerase...	0.05	OrthoFinder output from all 47 species
Zm00001e014636_P002	TIL1, POL2A,...	catalytic component POL2/POLE1 of DNA polymerase epsilon complex	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003887	DNA-directed DNA polymerase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006260	DNA replication	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016779	nucleotidyltransferase activity	None	Extended
MF	GO:0034061	DNA polymerase activity	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR013697	DNA_pol_e_suA_C	1587	1948
IPR006133	DNA-dir_DNA_pol_B_exonuc	108	438
IPR006134	DNA-dir_DNA_pol_B_multi_dom	804	1102

External Links

No external refs found!

Aspi01Gene24972.t1 (TIL1, POL2A, ABO4,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation