Solyc01g087040.2.1 (Solyc01g087040.2)


Aliases : Solyc01g087040.2

Description : 35.2 not assigned.unknown Conceptual translation of this open reading frame gave the sequence of a 229-residue hypothetical protein that


Gene families : OG_01_0009453 (Gene family) Phylogenetic Tree(s): OG0009453_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc01g087040.2.1
Cluster HCCA cluster: Cluster_149

Target Alias Description ECC score Gene Family Method Actions
Cre03.g198850 No alias 35.2 not assigned.unknown Conceptual translation of this... 0.05 Gene family
LOC_Os08g39430 Os08g0504500 35.2 not assigned.unknown Conceptual translation of this... 0.07 Gene family
MA_132558g0010 No alias 35.2 not assigned.unknown Conceptual translation of this... 0.05 Gene family
Zm00001d031421 GRMZM2G441888 35.2 not assigned.unknown Conceptual translation of this... 0.08 Gene family

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan
CC GO:0009523 photosystem II IEA InterProScan
CC GO:0009654 photosystem II oxygen evolving complex IEA InterProScan
BP GO:0015979 photosynthesis IEA InterProScan
CC GO:0019898 extrinsic component of membrane IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002683 PsbP_C 98 238
No external refs found!