Aspi01Gene24552.t1 (Aspi01Gene24552)


Aliases : Aspi01Gene24552

Description : squalene-hopene cyclase & original description: none


Gene families : OG0002047 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002047_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene24552.t1
Cluster HCCA: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
Ala_g28633 ATLUP2, LUP2 squalene-hopene cyclase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06696 ATLUP2, LUP2 squalene-hopene cyclase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06990 No alias squalene-hopene cyclase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07397 ATLUP2, LUP2 EC_5.4 intramolecular transferase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g17465 ATLUP2, LUP2 squalene-hopene cyclase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g55523 No alias squalene-hopene cyclase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g69424 ATLUP2, LUP2 EC_5.4 intramolecular transferase & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene10453.t1 ATLUP2, LUP2,... squalene-hopene cyclase & original description: none 0.09 OrthoFinder output from all 47 species
Aspi01Gene24548.t1 Aspi01Gene24548 squalene-hopene cyclase & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene24550.t1 Aspi01Gene24550 squalene-hopene cyclase & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene36059.t1 ATLUP2, LUP2,... squalene-hopene cyclase & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene36140.t1 Aspi01Gene36140 squalene-hopene cyclase & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene63178.t1 Aspi01Gene63178 EC_5.4 intramolecular transferase & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene63179.t1 Aspi01Gene63179 EC_5.4 intramolecular transferase & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene63185.t1 Aspi01Gene63185 squalene-hopene cyclase & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g05266 ATLUP2, LUP2 EC_5.4 intramolecular transferase & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.1Z102200.1 ATLUP2, LUP2,... squalene-hopene cyclase & original description:... 0.01 OrthoFinder output from all 47 species
Ceric.24G077100.1 ATLUP2, LUP2,... not classified & original description: pacid=50629603... 0.01 OrthoFinder output from all 47 species
Dcu_g19102 ATLUP2, LUP2 EC_5.4 intramolecular transferase & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g31336 ATLUP2, LUP2 EC_5.4 intramolecular transferase & original description: none 0.03 OrthoFinder output from all 47 species
Mp2g20110.1 No alias Dammaradiene synthase OS=Dryopteris crassirhizoma... 0.02 OrthoFinder output from all 47 species
Mp8g14150.1 LAS1 Dammaradiene synthase OS=Dryopteris crassirhizoma... 0.02 OrthoFinder output from all 47 species
Nbi_g27245 No alias squalene-hopene cyclase & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g43954 ATLUP2, LUP2 squalene-hopene cyclase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g42306 No alias EC_5.4 intramolecular transferase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g18017 ATLUP2, LUP2 squalene-hopene cyclase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05657 No alias squalene-hopene cyclase & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g15618 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004522 ATLUP2, LUP2 squalene-hopene cyclase & original description: CDS=1-2067 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007471 ATLUP2, LUP2 squalene-hopene cyclase & original description: CDS=1-2091 0.03 OrthoFinder output from all 47 species
Tin_g44706 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR032697 SQ_cyclase_N 1 135
IPR032696 SQ_cyclase_C 143 269
No external refs found!