Solyc01g086820.3.1 (Solyc01g086820.3)


Aliases : Solyc01g086820.3

Description : 28.1.3.2.3 DNA.synthesis/chromatin structure.histone.core.H3 Histone superfamily protein


Gene families : OG_01_0000050 (Gene family) Phylogenetic Tree(s): OG0000050_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc01g086820.3.1
Cluster HCCA cluster: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
AT1G09200 No alias Histone superfamily protein 0.1 Gene family
AT3G27360 No alias Histone superfamily protein 0.09 Gene family
AT4G40040 No alias Histone superfamily protein 0.05 Gene family
AT5G10390 No alias Histone superfamily protein 0.13 Gene family
AT5G10400 No alias Histone superfamily protein 0.14 Gene family
AT5G65360 No alias Histone superfamily protein 0.12 Gene family
Cre06.g265000 No alias 28.1.3.2.3 DNA.synthesis/chromatin... 0.01 Gene family
Cre16.g661450 No alias 28.1.3.2.3 DNA.synthesis/chromatin... 0.07 Gene family
GSVIVT01025316001 No alias 28.1.3.2.3 DNA.synthesis/chromatin... 0.08 Gene family
GSVIVT01025318001 No alias 28.1.3.2.3 DNA.synthesis/chromatin... 0.14 Gene family
GSVIVT01026582001 No alias 28.1.3.2.3 DNA.synthesis/chromatin... 0.11 Gene family
GSVIVT01027073001 No alias 28.1 DNA.synthesis/chromatin structure Encodes a... 0.11 Gene family
GSVIVT01032047001 No alias 28.1.3.2.3 DNA.synthesis/chromatin... 0.09 Gene family
GSVIVT01034510001 No alias 28.1.3.2.3 DNA.synthesis/chromatin... 0.1 Gene family
LOC_Os01g64640 Os01g0866200 28.1.3.2.3 DNA.synthesis/chromatin... 0.08 Gene family
LOC_Os04g34240 Os04g0419600 28.1.3.2.3 DNA.synthesis/chromatin... 0.1 Gene family
LOC_Os05g36280 Os05g0438700 28.1.3.2.3 DNA.synthesis/chromatin... 0.09 Gene family
LOC_Os05g41080 Os05g0489800 28.1.3.2.3 DNA.synthesis/chromatin... 0.11 Gene family
LOC_Os06g06460 Os06g0159450 28.1.3.2.3 DNA.synthesis/chromatin... 0.12 Gene family
LOC_Os06g06480 Os06g0159725,... 28.1.3.2.3 DNA.synthesis/chromatin... 0.07 Gene family
LOC_Os06g06510 Os06g0160100 28.1.3.2.3 DNA.synthesis/chromatin... 0.03 Gene family
LOC_Os11g05730 Os11g0155900 28.1.3.2.3 DNA.synthesis/chromatin... 0.14 Gene family
MA_113838g0010 No alias 28.1.3.2.3 DNA.synthesis/chromatin... 0.03 Gene family
MA_125055g0020 No alias 28.1.3.2.3 DNA.synthesis/chromatin... 0.04 Gene family
MA_131523g0020 No alias 28.1.3.2.3 DNA.synthesis/chromatin... 0.02 Gene family
MA_153387g0010 No alias 28.1.3.2.3 DNA.synthesis/chromatin... 0.03 Gene family
MA_159785g0010 No alias 28.1.3.2.3 DNA.synthesis/chromatin... 0.02 Gene family
MA_172878g0010 No alias 28.1.3.2.3 DNA.synthesis/chromatin... 0.02 Gene family
MA_17527g0010 No alias 28.1.3.2.3 DNA.synthesis/chromatin... 0.03 Gene family
MA_197719g0010 No alias 28.1.3.2.3 DNA.synthesis/chromatin... 0.07 Gene family
MA_210354g0010 No alias 28.1.3.2.3 DNA.synthesis/chromatin... 0.02 Gene family
MA_350032g0010 No alias 28.1.3.2.3 DNA.synthesis/chromatin... 0.08 Gene family
MA_356208g0010 No alias 28.1.3.2.3 DNA.synthesis/chromatin... 0.02 Gene family
MA_475294g0010 No alias 28.1.3.2.3 DNA.synthesis/chromatin... 0.07 Gene family
MA_561217g0010 No alias 28.1.3.2.3 DNA.synthesis/chromatin... 0.05 Gene family
MA_56411g0010 No alias 28.1.3.2.3 DNA.synthesis/chromatin... 0.07 Gene family
MA_74555g0010 No alias 28.1.3.2.3 DNA.synthesis/chromatin... 0.08 Gene family
Smo103546 PACid_15409822 No description available 0.02 Gene family
Smo176603 PACid_15402605 No description available 0.03 Gene family
Smo269004 PACid_15414065 No description available 0.02 Gene family
Smo438193 PACid_15419016 No description available 0.03 Gene family
Smo78992 PACid_15403087 No description available 0.03 Gene family
Zm00001d003725 GRMZM2G447984 28.1.3.2.3 DNA.synthesis/chromatin... 0.08 Gene family
Zm00001d003730 GRMZM5G864735 28.1.3.2.3 DNA.synthesis/chromatin... 0.12 Gene family
Zm00001d012276 No alias 28.1.3.2.3 DNA.synthesis/chromatin... 0.14 Gene family
Zm00001d016723 GRMZM2G451254 28.1.3.2.3 DNA.synthesis/chromatin... 0.08 Gene family
Zm00001d025406 GRMZM2G355773 28.1.3.2.3 DNA.synthesis/chromatin... 0.1 Gene family
Zm00001d036036 GRMZM2G171387 28.1.3.2.3 DNA.synthesis/chromatin... 0.02 Gene family
Zm00001d036250 GRMZM2G376957 28.1.3.2.3 DNA.synthesis/chromatin... 0.13 Gene family
Zm00001d039790 GRMZM2G401581 28.1.3.2.3 DNA.synthesis/chromatin... 0.08 Gene family
Zm00001d041672 GRMZM2G475899 28.1.3.2.3 DNA.synthesis/chromatin... 0.08 Gene family
Zm00001d042730 GRMZM2G078314 28.1.3.2.3 DNA.synthesis/chromatin... 0.11 Gene family
Zm00001d045268 GRMZM2G130079 28.1.3.2.3 DNA.synthesis/chromatin... 0.09 Gene family
Zm00001d045475 GRMZM2G118355 28.1.3.2.3 DNA.synthesis/chromatin... 0.06 Gene family
Zm00001d050697 GRMZM2G418258 28.1.3.2.3 DNA.synthesis/chromatin... 0.14 Gene family

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA InterProScan
MF GO:0003677 DNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 1 132
No external refs found!