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  5. Aspi01Gene24487.t1

Aspi01Gene24487.t1 (GAMMA-H2AX, HTA5,...)


Aliases : GAMMA-H2AX, HTA5, G-H2AX, H2AXA, Aspi01Gene24487

Description : histone *(H2A) & original description: none


Gene families : OG0000117 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000117_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene24487.t1

Target Alias Description ECC score Gene Family Method Actions
AT1G51060 HTA10 histone H2A 10 0.02 OrthoFinder output from all 47 species
AT5G59870 HTA6 histone H2A 6 0.05 OrthoFinder output from all 47 species
Adi_g011160 HTA7 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g011169 HTA7 histone *(H2A) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g011320 GAMMA-H2AX,... histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g25028 GAMMA-H2AX,... histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09992 GAMMA-H2AX,... histone *(H2A) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g09993 GAMMA-H2AX,... histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g06100 HTA6 histone *(H2A) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g11808 HTA6 histone *(H2A) & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g05168 GAMMA-H2AX,... histone *(H2A) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g32293 HTA6 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g42744 GAMMA-H2AX,... histone *(H2A) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g10226 GAMMA-H2AX,... histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g31800.1 HTA12, LOC_Os01g31800 histone (H2A) 0.03 OrthoFinder output from all 47 species
LOC_Os03g17100.1 HTA12, LOC_Os03g17100 histone (H2A) 0.02 OrthoFinder output from all 47 species
MA_74667g0010 HTA7 histone (H2A) 0.02 OrthoFinder output from all 47 species
Msp_g04700 HTA7 histone *(H2A) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g11191 GAMMA-H2AX,... histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g29485 GAMMA-H2AX,... histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g08324 HTA6 histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g05881 HTA6 histone *(H2A) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g03457 GAMMA-H2AX,... histone *(H2A) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0210.g025887 GAMMA-H2AX,... histone *(H2A) & original description: CDS=1-531 0.03 OrthoFinder output from all 47 species
Sam_g10764 No alias histone *(H2A) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g10765 No alias histone *(H2A) & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g29426 No alias histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g48398 No alias histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g099410.3.1 HTA7, Solyc01g099410 histone (H2A) 0.04 OrthoFinder output from all 47 species
Solyc09g082710.3.1 GAMMA-H2AX,... histone (H2A) 0.04 OrthoFinder output from all 47 species
Spa_g03221 HTA6 histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g03519 GAMMA-H2AX,... histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g46345 GAMMA-H2AX,... histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e011643_P001 HTA6, Zm00001e011643 histone (H2A) 0.04 OrthoFinder output from all 47 species
Zm00001e020483_P001 HTA6, Zm00001e020483 histone (H2A) 0.03 OrthoFinder output from all 47 species
Zm00001e033014_P001 HTA6, Zm00001e033014 histone (H2A) 0.03 OrthoFinder output from all 47 species
Zm00001e034815_P001 HTA12, Zm00001e034815 histone (H2A) 0.03 OrthoFinder output from all 47 species
Zm00001e039735_P001 GAMMA-H2AX,... histone (H2A) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 10 87
IPR032454 Histone_H2A_C 90 121
No external refs found!