Aspi01Gene23958.t1 (HSP93-V, DCA1,...)

Aliases : HSP93-V, DCA1, ATHSP93-V, CLPC, CLPC1, Aspi01Gene23958

Description : chaperone component *(ClpC) of chloroplast Clp-type protease complex & original description: none

Gene families : OG0000193 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000193_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene23958.t1
Cluster	HCCA: Cluster_111

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00016p00164160	HSP93-V, DCA1,...	External stimuli response.temperature.Hsp...	0.03	OrthoFinder output from all 47 species
Aop_g11008	HSP93-V, DCA1,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g20352	HSP93-V, DCA1,...	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Dcu_g08738	HSP93-V, DCA1,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Len_g34142	HSP93-V, DCA1,...	chaperone component *(ClpC) of chloroplast Clp-type...	0.01	OrthoFinder output from all 47 species
Smo133845	SAG15, CLPD, ERD1	Chaperone protein ClpD1, chloroplastic OS=Oryza sativa...	0.02	OrthoFinder output from all 47 species
Spa_g57173	HSP93-V, DCA1,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	311	440
IPR041546	ClpA/ClpB_AAA_lid	449	550
IPR003959	ATPase_AAA_core	648	823
IPR004176	Clp_R_dom	120	172
IPR004176	Clp_R_dom	196	247
IPR019489	Clp_ATPase_C	829	908

External Links

No external refs found!