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  5. Aspi01Gene23705.t1

Aspi01Gene23705.t1 (APUM12, PUM12, Aspi01Gene23705)


Aliases : APUM12, PUM12, Aspi01Gene23705

Description : not classified & original description: none


Gene families : OG0000858 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000858_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene23705.t1

Target Alias Description ECC score Gene Family Method Actions
Adi_g043258 APUM12, PUM12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g18476 APUM12, PUM12 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g63300 APUM12, PUM12 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020878.26 PUM7, APUM7 Pumilio homolog 12 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
MA_171998g0010 APUM12, PUM12 Pumilio homolog 12 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 348 366
IPR001313 Pumilio_RNA-bd_rpt 650 673
IPR001313 Pumilio_RNA-bd_rpt 543 572
IPR001313 Pumilio_RNA-bd_rpt 689 720
IPR001313 Pumilio_RNA-bd_rpt 467 500
IPR001313 Pumilio_RNA-bd_rpt 579 609
IPR001313 Pumilio_RNA-bd_rpt 505 536
IPR001313 Pumilio_RNA-bd_rpt 725 758
IPR001313 Pumilio_RNA-bd_rpt 614 647
No external refs found!