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  5. Aspi01Gene23704.t1

Aspi01Gene23704.t1 (APUM12, PUM12, Aspi01Gene23704)


Aliases : APUM12, PUM12, Aspi01Gene23704

Description : not classified & original description: none


Gene families : OG0000858 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000858_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene23704.t1

Target Alias Description ECC score Gene Family Method Actions
Adi_g008224 APUM12, PUM12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0040.g026500 APUM12, PUM12 not classified & original description: CDS=1-2874 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020878.26 PUM7, APUM7 Pumilio homolog 12 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Ore_g44911 APUM12, PUM12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g23501 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g18462 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001313 Pumilio_RNA-bd_rpt 718 746
IPR001313 Pumilio_RNA-bd_rpt 491 524
IPR001313 Pumilio_RNA-bd_rpt 531 560
IPR001313 Pumilio_RNA-bd_rpt 677 706
IPR001313 Pumilio_RNA-bd_rpt 640 658
IPR001313 Pumilio_RNA-bd_rpt 460 488
IPR001313 Pumilio_RNA-bd_rpt 602 635
IPR001313 Pumilio_RNA-bd_rpt 567 597
No external refs found!