Aspi01Gene23587.t1 (Aspi01Gene23587)

Aliases : Aspi01Gene23587

Description : E3 ubiquitin ligase & original description: none

Gene families : OG0000370 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000370_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene23587.t1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00261170	evm_27.TU.AmTr_v1...	Protein degradation.peptide tagging.Ubiquitin...	0.02	OrthoFinder output from all 47 species
Als_g40952	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os11g38800.1	LOC_Os11g38800	RING-v-class E3 ligase	0.03	OrthoFinder output from all 47 species
Len_g59358	No alias	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g09753	No alias	E3 ubiquitin ligase & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g09629	No alias	E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g06371	No alias	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g37701	No alias	E3 ubiquiTin ligase & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR022143	DUF3675	120	237
IPR011016	Znf_RING-CH	68	113

External Links

No external refs found!