Aspi01Gene23389.t2 (Aspi01Gene23389)


Aliases : Aspi01Gene23389

Description : not classified & original description: none


Gene families : OG0000309 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000309_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene23389.t2

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00123610 evm_27.TU.AmTr_v1... Protein JINGUBANG OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00156p00066850 evm_27.TU.AmTr_v1... Protein JINGUBANG OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G24130 No alias Transducin/WD40 repeat-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G49450 No alias Transducin/WD40 repeat-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G18950 No alias Transducin/WD40 repeat-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g023030 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g054356 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g00841 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g47144 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g19060 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g32167 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26053 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g27534 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g36145 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g53257 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05746.t1 Aspi01Gene05746 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene44873.t1 Aspi01Gene44873 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.13G024900.1 Ceric.13G024900 not classified & original description: pacid=50636356... 0.05 OrthoFinder output from all 47 species
Ceric.28G012400.1 Ceric.28G012400 not classified & original description: pacid=50570345... 0.05 OrthoFinder output from all 47 species
Ceric.28G012600.1 Ceric.28G012600 not classified & original description: pacid=50570711... 0.03 OrthoFinder output from all 47 species
Dac_g11331 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g26745 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g40515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14895 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01007589001 No alias Protein JINGUBANG OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01007825001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01031882001 No alias Protein JINGUBANG OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_14478 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species
Gb_27340 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os03g52870.1 LOC_Os03g52870 Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os12g40260.1 LOC_Os12g40260 Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10431396g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_107471g0010 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_634003g0010 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_9030464g0010 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp7g17880.1 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Ore_g16677 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g30709 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19634 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g25659 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60508 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005956 No alias not classified & original description: CDS=1-1941 0.03 OrthoFinder output from all 47 species
Smo66275 No alias Protein JINGUBANG OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc01g109120.3.1 Solyc01g109120 Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e005608_P001 Zm00001e005608 Protein JINGUBANG OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e007790_P001 Zm00001e007790 Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e041085_P001 Zm00001e041085 Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001680 WD40_repeat 51 85
IPR001680 WD40_repeat 180 209
IPR001680 WD40_repeat 261 296
IPR001680 WD40_repeat 315 345
IPR001680 WD40_repeat 357 400
No external refs found!