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  5. Aspi01Gene23299.t1

Aspi01Gene23299.t1 (AGO7, ZIP, Aspi01Gene23299)


Aliases : AGO7, ZIP, Aspi01Gene23299

Description : not classified & original description: none


Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene23299.t1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00069070 AGO7, ZIP,... Chromatin organisation.DNA methylation.canonical... 0.03 OrthoFinder output from all 47 species
Als_g40616 AGO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g41650 PNH, AGO10, ZLL not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g60456 AGO7, ZIP not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g05330 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.03 OrthoFinder output from all 47 species
Cba_g16426 AGO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g39598 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.02 OrthoFinder output from all 47 species
Dde_g07096 AGO9 siRNA-integrating factor *(AGO) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g50313 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.04 OrthoFinder output from all 47 species
GSVIVT01015464001 PNH, AGO10, ZLL Chromatin organisation.DNA methylation.canonical... 0.02 OrthoFinder output from all 47 species
GSVIVT01030512001 AGO6 Chromatin organisation.DNA methylation.canonical... 0.03 OrthoFinder output from all 47 species
LOC_Os03g47830.1 AGO5, LOC_Os03g47830 Protein argonaute 11 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
MA_159389g0010 AGO7, ZIP Protein argonaute 7 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_47087g0010 AGO4, OCP11 Protein argonaute 7 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
MA_85246g0010 AGO9 Protein argonaute 4A OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Msp_g03218 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.04 OrthoFinder output from all 47 species
Ore_g16802 AGO5 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo98227 AGO1 Chromatin organisation.DNA methylation.canonical... 0.02 OrthoFinder output from all 47 species
Solyc01g096750.1.1 AGO4, OCP11,... siRNA-integrating factor (AGO) 0.02 OrthoFinder output from all 47 species
Solyc06g073530.3.1 AGO4, OCP11,... siRNA-integrating factor (AGO) 0.02 OrthoFinder output from all 47 species
Spa_g57163 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003100 PAZ_dom 4 64
IPR003165 Piwi 232 413
IPR032472 ArgoL2 75 121
No external refs found!