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  5. Aspi01Gene23079.t1

Aspi01Gene23079.t1 (UBQ4, Aspi01Gene23079)


Aliases : UBQ4, Aspi01Gene23079

Description : UBQ ubiquitin-fold protein & original description: none


Gene families : OG0000054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene23079.t1
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
Aev_g40141 UBQ10 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Als_g08770 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Als_g24990 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Als_g26970 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30978 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Als_g49928 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.05 OrthoFinder output from all 47 species
Als_g59298 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Als_g63264 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11373 UBQ6 component *(eS31) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Aspi01Gene15129.t1 UBQ11, Aspi01Gene15129 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene18516.t1 UBQ11, Aspi01Gene18516 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene23081.t1 UBQ11, Aspi01Gene23081 UBQ ubiquitin-fold protein & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene23135.t1 UBQ11, Aspi01Gene23135 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene57837.t1 UBQ10, Aspi01Gene57837 UBQ ubiquitin-fold protein & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g22840 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34959 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g26865 UBQ11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28640 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01028198001 No alias Ubiquitin-NEDD8-like protein RUB1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os04g53620.1 UBQ4, LOC_Os04g53620 ubiquitin-fold protein (UBQ) 0.03 OrthoFinder output from all 47 species
LOC_Os10g39590.1 LOC_Os10g39590 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_20231g0010 UBQ14 ubiquitin-fold protein (UBQ) 0.03 OrthoFinder output from all 47 species
MA_9108314g0010 UBQ11 Polyubiquitin 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_9401507g0010 UBQ11 Polyubiquitin (Fragment) OS=Hordeum vulgare... 0.03 OrthoFinder output from all 47 species
Pnu_g16415 UBQ11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc09g098385.1.1 Solyc09g098385 Ubiquitin-40S ribosomal protein S27a OS=Solanum... 0.03 OrthoFinder output from all 47 species
Solyc10g006480.2.1 UBQ10, Solyc10g006480 ubiquitin-fold protein (UBQ) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 3 74
IPR000626 Ubiquitin-like_dom 79 150
IPR000626 Ubiquitin-like_dom 231 297
IPR000626 Ubiquitin-like_dom 330 387
IPR000626 Ubiquitin-like_dom 155 226
No external refs found!