Aspi01Gene23041.t1 (PAB2, PABP2, ATPAB2,...)

Aliases : PAB2, PABP2, ATPAB2, Aspi01Gene23041

Description : mRNA poly-A-tail binding factor *(PABP) & original description: none

Gene families : OG0000326 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000326_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene23041.t1
Cluster	HCCA: Cluster_154

Target	Alias	Description	ECC score	Gene Family Method
Als_g19989	PAB2, PABP2, ATPAB2	mRNA poly-A-tail binding factor *(PABP) & original...	0.03	OrthoFinder output from all 47 species
Aob_g14746	PAB8, PABP8	mRNA poly-A-tail binding factor *(PABP) & original...	0.02	OrthoFinder output from all 47 species
Dde_g51529	PAB2, PABP2, ATPAB2	mRNA poly-A-tail binding factor *(PABP) & original...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002004	PABP_HYD	543	607
IPR000504	RRM_dom	104	170
IPR000504	RRM_dom	194	262
IPR000504	RRM_dom	16	86
IPR000504	RRM_dom	297	365

External Links

No external refs found!