Aspi01Gene22864.t1 (TUB2, Aspi01Gene22864)

Aliases : TUB2, Aspi01Gene22864

Description : beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer & original description: none

Gene families : OG0000152 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000152_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene22864.t1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00009p00251790	TUB8,...	Cytoskeleton.microtubular network.alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
AMTR_s00009p00255970	TUB8,...	Cytoskeleton.microtubular network.alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
AMTR_s00029p00190040	TUB8,...	Cytoskeleton.microtubular network.alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
AMTR_s00101p00135960	TUB6	Cytoskeleton.microtubular network.alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
AT5G12250	TUB6	beta-6 tubulin	0.03	OrthoFinder output from all 47 species
AT5G23860	TUB8	tubulin beta 8	0.04	OrthoFinder output from all 47 species
Adi_g099314	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.01	OrthoFinder output from all 47 species
Adi_g107584	TUB2	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g37847	TUB8	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Aspi01Gene61960.t1	TUB1, Aspi01Gene61960	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0065.g035841	TUB1	not classified & original description: CDS=1-585	0.03	OrthoFinder output from all 47 species
Cba_g14289	TUB8	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Cba_g15536	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Ceric.04G088300.1	TUB8, Ceric.04G088300	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Dac_g42639	TUB8	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Dcu_g13447	TUB2	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Ehy_g30121	TUB8	not classified & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os03g56810.1	TUB8, LOC_Os03g56810	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.01	OrthoFinder output from all 47 species
Len_g43850	TUB8	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
MA_230579g0020	TUB6	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.02	OrthoFinder output from all 47 species
Ppi_g05536	TUB8	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Ppi_g62362	TUB8	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0108.g020465	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Smo23403	TUB2	Cytoskeleton.microtubular network.alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Smo410535	TUB2	Cytoskeleton.microtubular network.alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Solyc03g118760.4.1	TUB6, Solyc03g118760	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.01	OrthoFinder output from all 47 species
Spa_g15965	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR018316	Tubulin/FtsZ_2-layer-sand-dom	261	382
IPR003008	Tubulin_FtsZ_GTPase	3	211

External Links

No external refs found!

Aspi01Gene22864.t1 (TUB2, Aspi01Gene22864)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation