Aspi01Gene22844.t1 (Aspi01Gene22844)


Aliases : Aspi01Gene22844

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene22844.t1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00185560 VAC1, ECB2, ATECB2 RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
Aev_g11535 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g48664 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24718 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26563 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37348 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16410 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0010.g012371 No alias ssDNA-binding protein *(OSB) & original description: CDS=115-528 0.02 OrthoFinder output from all 47 species
Azfi_s0015.g013967 No alias not classified & original description: CDS=1-2631 0.02 OrthoFinder output from all 47 species
Cba_g06233 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07194 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g18809 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20479 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g23308 OSB4 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g68679 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G032600.1 Ceric.09G032600 not classified & original description: pacid=50587514... 0.02 OrthoFinder output from all 47 species
Ceric.21G010300.1 Ceric.21G010300 not classified & original description: pacid=50603707... 0.02 OrthoFinder output from all 47 species
Ceric.25G002100.1 Ceric.25G002100 not classified & original description: pacid=50593112... 0.03 OrthoFinder output from all 47 species
Ceric.26G056100.1 Ceric.26G056100 not classified & original description: pacid=50599681... 0.03 OrthoFinder output from all 47 species
Dac_g23468 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g27772 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g38628 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g43122 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g47882 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g09208 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22635 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g47808 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50257 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os05g50950.1 LOC_Os05g50950 Pentatricopeptide repeat-containing protein At4g01030,... 0.02 OrthoFinder output from all 47 species
Len_g10885 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17732 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18068 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g36343 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g40021 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g56738 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03418 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06276 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g37537 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_107723g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
MA_1109g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.02 OrthoFinder output from all 47 species
MA_124907g0010 CRR22 Pentatricopeptide repeat-containing protein At2g13600... 0.02 OrthoFinder output from all 47 species
MA_480955g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Msp_g31349 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g37617 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g44153 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45751 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g48763 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g30748 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06959 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29583 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g49012 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g05209 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13567 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13864 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16312 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g33428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g40244 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo90123 OTP84 Pentatricopeptide repeat-containing protein At3g22690... 0.02 OrthoFinder output from all 47 species
Smo92426 EMB2758 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Spa_g23700 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g44700 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g45966 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 31 61
IPR002885 Pentatricopeptide_repeat 435 463
IPR002885 Pentatricopeptide_repeat 406 432
IPR002885 Pentatricopeptide_repeat 302 330
IPR002885 Pentatricopeptide_repeat 533 573
IPR002885 Pentatricopeptide_repeat 129 176
IPR002885 Pentatricopeptide_repeat 331 377
IPR002885 Pentatricopeptide_repeat 230 277
No external refs found!