AMTR_s00109p00089980 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00109.75

Description : Vesicle trafficking.target membrane tethering.Golgi membrane tethering factors.GC5/TMF-type golgin


Gene families : OG_01_0003240 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003240_tree ,
OG_02_0004501 (LandPlants) Phylogenetic Tree(s): OG_02_0004501_tree ,
OG_03_0004575 (SeedPlants) Phylogenetic Tree(s): OG_03_0004575_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00109p00089980
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000388.17 No alias No description available 0.01 Archaeplastida
Cre03.g187000 No alias Golgin candidate 5 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01038690001 No alias Vesicle trafficking.target membrane tethering.Golgi... 0.03 Archaeplastida
Zm00001e026507_P001 No alias golgin (GC5/TMF) 0.03 Archaeplastida
Zm00001e026510_P001 No alias Golgin candidate 5 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e032402_P001 No alias golgin (GC5/TMF) 0.04 Archaeplastida
GSVIVT01038690001 No alias Vesicle trafficking.target membrane tethering.Golgi... 0.03 LandPlants
Mp8g06100.1 No alias golgin (GC5/TMF) 0.01 LandPlants
Zm00001e026507_P001 No alias golgin (GC5/TMF) 0.03 LandPlants
Zm00001e026510_P001 No alias Golgin candidate 5 OS=Arabidopsis thaliana... 0.04 LandPlants
Zm00001e032402_P001 No alias golgin (GC5/TMF) 0.02 LandPlants
AT1G79830 GC5 golgin candidate 5 0.01 SeedPlants
GSVIVT01038690001 No alias Vesicle trafficking.target membrane tethering.Golgi... 0.03 SeedPlants
Zm00001e026507_P001 No alias golgin (GC5/TMF) 0.03 SeedPlants
Zm00001e026510_P001 No alias Golgin candidate 5 OS=Arabidopsis thaliana... 0.04 SeedPlants
Zm00001e032402_P001 No alias golgin (GC5/TMF) 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR022091 TMF_TATA-bd 834 943
IPR022092 TMF_DNA-bd 417 488
No external refs found!