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  5. Aspi01Gene22307.t2

Aspi01Gene22307.t2 (ATPIN1, PIN1, Aspi01Gene22307)


Aliases : ATPIN1, PIN1, Aspi01Gene22307

Description : auxin efflux transporter *(PIN) & original description: none


Gene families : OG0000569 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000569_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene22307.t2

Target Alias Description ECC score Gene Family Method Actions
AT1G70940 PIN3, ATPIN3 Auxin efflux carrier family protein 0.03 OrthoFinder output from all 47 species
Aev_g27966 ATPIN4, PIN4 auxin efflux transporter *(PIN) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g26007 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.08 OrthoFinder output from all 47 species
Aob_g06049 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g18588 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g13516 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01031663001 PIN3, ATPIN3 Solute transport.carrier-mediated transport.BART... 0.04 OrthoFinder output from all 47 species
LOC_Os06g44970.1 EIR1, WAV6,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 OrthoFinder output from all 47 species
Lfl_g19133 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011672 PIN6 auxin efflux transporter *(PIN) & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0038.g012005 PIN7, ATPIN7 auxin efflux transporter *(PIN) & original description:... 0.03 OrthoFinder output from all 47 species
Solyc10g080880.2.1 ATPIN1, PIN1,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species
Zm00001e015800_P001 ATPIN1, PIN1,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 OrthoFinder output from all 47 species
Zm00001e037682_P001 EIR1, WAV6,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004776 Mem_trans 51 707
No external refs found!