Aspi01Gene21814.t1 (PAB2, PABP2, ATPAB2,...)

Aliases : PAB2, PABP2, ATPAB2, Aspi01Gene21814

Description : mRNA poly-A-tail binding factor *(PABP) & original description: none

Gene families : OG0000326 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000326_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene21814.t1
Cluster	HCCA: Cluster_30

Target	Alias	Description	ECC score	Gene Family Method
Als_g23023	PAB2, PABP2, ATPAB2	mRNA poly-A-tail binding factor *(PABP) & original...	0.03	OrthoFinder output from all 47 species
Dcu_g37315	PAB2, PABP2, ATPAB2	mRNA poly-A-tail binding factor *(PABP) & original...	0.03	OrthoFinder output from all 47 species
Len_g50808	PAB8, PABP8	mRNA poly-A-tail binding factor *(PABP) & original...	0.04	OrthoFinder output from all 47 species
Pnu_g30261	PAB8, PABP8	mRNA poly-A-tail binding factor *(PABP) & original...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	142	210
IPR000504	RRM_dom	245	312
IPR000504	RRM_dom	52	119
IPR002004	PABP_HYD	508	572

External Links

No external refs found!