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  5. Aspi01Gene20552.t1

Aspi01Gene20552.t1 (Aspi01Gene20552)


Aliases : Aspi01Gene20552

Description : RING-H2-class ATL-subclass E3 ubiquitin ligase & original description: none


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene20552.t1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00271850 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AMTR_s00008p00185200 ATL6,... Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
AMTR_s00008p00200880 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.05 OrthoFinder output from all 47 species
AMTR_s00044p00221710 RHA2A,... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AMTR_s00129p00065710 ATL2, TL2,... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AT3G03550 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G05200 ATL6 RING/U-box superfamily protein 0.07 OrthoFinder output from all 47 species
AT4G00305 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G17905 ATL4H RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G10380 ATRING1, RING1 RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G27420 ATL31, CNI1 carbon/nitrogen insensitive 1 0.03 OrthoFinder output from all 47 species
AT5G58580 ATL63, TL63 TOXICOS EN LEVADURA 63 0.03 OrthoFinder output from all 47 species
Adi_g049763 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g118032 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Als_g13439 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Als_g17608 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Als_g23534 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Als_g26313 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Aob_g01755 ATL8 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aob_g04272 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Aop_g03042 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene13378.t1 Aspi01Gene13378 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene46825.t1 ATL2, TL2,... RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.06 OrthoFinder output from all 47 species
Aspi01Gene52668.t1 ATL2, TL2,... RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Aspi01Gene65294.t1 Aspi01Gene65294 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Cba_g26664 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Cba_g27531 ATL4H RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.06 OrthoFinder output from all 47 species
Ceric.07G057400.1 Ceric.07G057400 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ceric.07G057500.1 Ceric.07G057500 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.07G057700.1 Ceric.07G057700 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ceric.15G075700.1 Ceric.15G075700 not classified & original description: pacid=50639640... 0.03 OrthoFinder output from all 47 species
Ceric.18G040500.1 Ceric.18G040500 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.18G057500.1 Ceric.18G057500 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.21G001100.1 ATL2, TL2,... RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ceric.22G062000.1 Ceric.22G062000 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Ceric.30G049300.1 Ceric.30G049300 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.33G012100.1 Ceric.33G012100 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.39G005300.1 ATL2, TL2,... RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Dac_g12436 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dac_g38926 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g00774 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dcu_g05475 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Dcu_g40181 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06418 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ehy_g25748 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ehy_g26838 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ehy_g30250 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01000015001 ATL6 Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
GSVIVT01012019001 XERICO Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01028306001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01037142001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.05 OrthoFinder output from all 47 species
Gb_14778 No alias RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Gb_20461 No alias RING-H2-class E3 ligase 0.07 OrthoFinder output from all 47 species
Gb_28973 BRH1 Probable E3 ubiquitin-protein ligase RHA1A... 0.03 OrthoFinder output from all 47 species
Gb_28980 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_36232 No alias IDF1 iron uptake IRT1-ubiquitin ligase 0.03 OrthoFinder output from all 47 species
LOC_Os01g11520.1 LOC_Os01g11520 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os02g15060.1 LOC_Os02g15060 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os02g36330.1 LOC_Os02g36330 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os02g46600.1 LOC_Os02g46600 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os02g52210.1 ATL31, CNI1,... RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os03g44636.1 LOC_Os03g44636 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os04g37740.1 ATRING1, RING1,... RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
LOC_Os04g49000.1 BRH1, LOC_Os04g49000 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g09310.1 LOC_Os06g09310 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os08g34550.1 LOC_Os08g34550 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os08g44950.1 LOC_Os08g44950 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os09g30160.1 XERICO, LOC_Os09g30160 ubiquitin protein ligase (XERICO) 0.03 OrthoFinder output from all 47 species
LOC_Os09g38110.1 LOC_Os09g38110 RING-H2 finger protein ATL80 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os12g42530.1 RHA3B, LOC_Os12g42530 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g12736 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10106144g0010 ATL2, TL2 RING-H2-class E3 ligase 0.05 OrthoFinder output from all 47 species
MA_10435495g0010 No alias RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
MA_10436650g0010 ATL2, TL2 RING-H2-class E3 ligase 0.05 OrthoFinder output from all 47 species
MA_107765g0010 ATL6 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
MA_132693g0010 No alias RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
MA_223372g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_229590g0010 No alias RING-H2-class E3 ligase 0.05 OrthoFinder output from all 47 species
MA_37578g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_3929631g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_465316g0010 ATL2, TL2 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
MA_6007471g0010 No alias RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
MA_61738g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_77628g0010 ATL2, TL2 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
MA_80729g0030 ATL2, TL2 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
MA_904294g0010 ATL3 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
MA_9764263g0010 No alias RING-H2 finger protein ATL67 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp1g27170.1 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Mp5g08270.1 No alias RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Msp_g16085 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Msp_g18716 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g20330 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Nbi_g07839 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Nbi_g14103 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Nbi_g24015 RHA3A RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ore_g00818 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ore_g09566 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g10431 XERICO not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g12550 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ore_g16147 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ore_g18004 ATL5 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ore_g20730 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ore_g30955 XERICO not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g32541 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.06 OrthoFinder output from all 47 species
Pir_g38125 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017128 No alias not classified & original description: CDS=1-1311 0.05 OrthoFinder output from all 47 species
Smo39820 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Smo59303 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
Solyc01g066430.3.1 ATL2, TL2, Solyc01g066430 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
Solyc03g083460.3.1 Solyc03g083460 RING-H2 finger protein ATL22 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc03g112340.1.1 ATL31, CNI1,... RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Solyc06g053640.1.1 Solyc06g053640 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
Solyc09g089890.1.1 Solyc09g089890 RING-H2-class E3 ligase 0.06 OrthoFinder output from all 47 species
Solyc12g055710.1.1 ATL3, Solyc12g055710 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Spa_g02204 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Spa_g16053 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Spa_g24917 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Spa_g37346 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Spa_g39301 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Tin_g37222 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.04 OrthoFinder output from all 47 species
Zm00001e000398_P001 Zm00001e000398 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e003264_P001 Zm00001e003264 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e007129_P001 Zm00001e007129 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e009988_P001 ATL6, Zm00001e009988 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e014302_P001 Zm00001e014302 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e014832_P001 Zm00001e014832 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e015495_P001 Zm00001e015495 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e016092_P001 Zm00001e016092 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e016470_P001 Zm00001e016470 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e019438_P001 Zm00001e019438 RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e020958_P001 Zm00001e020958 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e023238_P001 Zm00001e023238 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e034421_P001 ATL6, Zm00001e034421 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
Zm00001e035560_P001 ATL3, Zm00001e035560 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 114 157
No external refs found!