Aspi01Gene20300.t1 (ATCNGC20, CNGC20,...)


Aliases : ATCNGC20, CNGC20, CNBT1, Aspi01Gene20300

Description : not classified & original description: none


Gene families : OG0000170 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000170_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene20300.t1

Target Alias Description ECC score Gene Family Method Actions
AT4G01010 ATCNGC13, CNGC13 cyclic nucleotide-gated channel 13 0.03 OrthoFinder output from all 47 species
Als_g15919 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-gated cation channel *(CNGC) &... 0.02 OrthoFinder output from all 47 species
Dac_g14388 CNGC15, ATCNGC15 cyclic nucleotide-gated cation channel *(CNGC) &... 0.04 OrthoFinder output from all 47 species
Dcu_g03033 DND1, ATCNGC2, CNGC2 temperature sensor protein *(CNGC2) & original description: none 0.01 OrthoFinder output from all 47 species
Len_g38744 DND1, ATCNGC2, CNGC2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g51567 CNGC19, ATCNGC19 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c26_570V3.1 CNGC15,... cyclic nucleotide-gated channel 16 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0191.g025297 DND1, ATCNGC2, CNGC2 cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Solyc05g050350.2.1 ATCNGC1, CNGC1,... cyclic nucleotide-gated cation channel (CNGC) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEA Interproscan
BP GO:0006811 monoatomic ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 26 172
No external refs found!