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  5. Aspi01Gene20280.t1

Aspi01Gene20280.t1 (Aspi01Gene20280)


Aliases : Aspi01Gene20280

Description : not classified & original description: none


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene20280.t1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00032810 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AMTR_s00044p00221710 RHA2A,... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AMTR_s00077p00070720 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AMTR_s00102p00069840 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AT1G53010 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G63840 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G14320 No alias Zinc finger, C3HC4 type (RING finger) family protein 0.01 OrthoFinder output from all 47 species
AT4G09110 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G07040 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G10380 ATRING1, RING1 RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G53110 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
Aev_g39979 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Als_g02144 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Als_g24156 ATL5 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Als_g46662 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene43906.t1 Aspi01Gene43906 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene70383.t1 Aspi01Gene70383 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0054.g033681 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Ceric.07G057600.1 Ceric.07G057600 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.12G015900.1 Ceric.12G015900 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Ceric.25G002800.1 Ceric.25G002800 not classified & original description: pacid=50594229... 0.03 OrthoFinder output from all 47 species
Ceric.29G079200.1 Ceric.29G079200 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Dac_g05542 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ehy_g26130 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
GSVIVT01009098001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Gb_04301 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_05381 No alias RHA2 signal transducer of abscisic acid perception 0.03 OrthoFinder output from all 47 species
LOC_Os01g16120.1 RHA2A, LOC_Os01g16120 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g53500.1 LOC_Os01g53500 RING-H2 finger protein ATL68 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os02g45390.1 LOC_Os02g45390 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os02g45710.1 BRH1, LOC_Os02g45710 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os02g45780.1 LOC_Os02g45780 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g05560.1 LOC_Os03g05560 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os03g30020.1 LOC_Os03g30020 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
LOC_Os05g45060.1 LOC_Os05g45060 RING-H2 finger protein ATL68 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os06g11450.1 ATL31, CNI1,... RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os06g34530.1 ATL43, LOC_Os06g34530 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os06g34650.1 LOC_Os06g34650 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os08g37760.1 ATL6, LOC_Os08g37760 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
Len_g38931 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Lfl_g24628 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
MA_10145129g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_130176g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_201391g0010 BRH1 Probable E3 ubiquitin-protein ligase RHA1A... 0.02 OrthoFinder output from all 47 species
MA_223372g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_391590g0010 BRH1 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_43543g0010 ATL2, TL2 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
MA_462422g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_7553g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp6g19130.1 ATL1F no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g40735 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Pir_g55439 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19950 ATL6 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ppi_g61044 RHA3A RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0074.g017298 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0081.g018006 XERICO not classified & original description: CDS=1-537 0.04 OrthoFinder output from all 47 species
Sam_g06931 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Sam_g31319 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo172324 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Smo438800 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species
Smo87949 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Solyc01g006910.4.1 Solyc01g006910 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Solyc01g095810.3.1 Solyc01g095810 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
Solyc05g010175.1.1 RHA2A, Solyc05g010175 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc10g009487.1.1 Solyc10g009487 RING-H2 finger protein ATL20 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc10g081780.3.1 Solyc10g081780 Putative RING-H2 finger protein ATL71 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc10g081790.1.1 Solyc10g081790 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
Solyc11g007530.2.1 Solyc11g007530 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Solyc11g066510.3.1 Solyc11g066510 RING-H2-class E3 ligase 0.01 OrthoFinder output from all 47 species
Solyc12g094690.1.1 Solyc12g094690 RING-H2 finger protein ATL8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g02204 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Spa_g17343 ATL6 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Spa_g22749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g41285 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Tin_g01893 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.03 OrthoFinder output from all 47 species
Tin_g38882 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.03 OrthoFinder output from all 47 species
Zm00001e000396_P001 Zm00001e000396 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e009766_P001 Zm00001e009766 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e015470_P001 ATL8, Zm00001e015470 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e020958_P001 Zm00001e020958 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e030930_P001 ATL3, Zm00001e030930 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e034421_P001 ATL6, Zm00001e034421 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 120 163
No external refs found!