Aspi01Gene19355.t1 (PUB26, Aspi01Gene19355)

Aliases : PUB26, Aspi01Gene19355

Description : not classified & original description: none

Gene families : OG0000127 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000127_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene19355.t1
Cluster	HCCA: Cluster_15

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00017p00223570	PUB26,...	U-box domain-containing protein 26 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AMTR_s00030p00159240	PUB23,...	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AT3G02840	No alias	ARM repeat superfamily protein	0.04	OrthoFinder output from all 47 species
AT3G52450	PUB22	plant U-box 22	0.02	OrthoFinder output from all 47 species
AT5G64660	CMPG2, ATCMPG2	CYS, MET, PRO, and GLY protein 2	0.04	OrthoFinder output from all 47 species
Adi_g003285	PUB25	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g014414	PUB25	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g077173	PUB25	U-Box-group-III E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g18167	PUB26	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aev_g21197	PUB25	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Als_g12715	PUB25	U-Box-group-III E3 ubiquitin ligase & original description: none	0.06	OrthoFinder output from all 47 species
Als_g23185	CMPG1, ATCMPG1	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Als_g23643	PUB26	U-Box-group-III E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
Als_g40105	PUB26	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Als_g57047	PUB23	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g60936	PUB25	E3 ubiquitin ligase & original description: none	0.06	OrthoFinder output from all 47 species
Als_g61569	PUB26	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g62359	PUB26	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g12417	PUB26	U-Box-group-III E3 ubiquitin ligase & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g16033	PUB23	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g20185	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene18444.t1	PUB23, Aspi01Gene18444	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene18467.t1	PUB23, Aspi01Gene18467	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Aspi01Gene19337.t1	PUB26, Aspi01Gene19337	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Aspi01Gene19351.t1	Aspi01Gene19351	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene43214.t1	PUB24, Aspi01Gene43214	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene43215.t1	PUB24, Aspi01Gene43215	not classified & original description: none	0.09	OrthoFinder output from all 47 species
Aspi01Gene44314.t1	PUB23, Aspi01Gene44314	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Aspi01Gene44315.t1	PUB23, Aspi01Gene44315	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Aspi01Gene44316.t1	PUB23, Aspi01Gene44316	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Aspi01Gene44317.t1	PUB23, Aspi01Gene44317	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Aspi01Gene44318.t1	PUB23, Aspi01Gene44318	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Aspi01Gene44320.t1	PUB23, Aspi01Gene44320	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene44321.t1	PUB23, Aspi01Gene44321	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Aspi01Gene51624.t1	PUB15, Aspi01Gene51624	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Azfi_s0096.g043747	PUB26	not classified & original description: CDS=1-1407	0.03	OrthoFinder output from all 47 species
Ceric.19G059800.1	PUB26, Ceric.19G059800	not classified & original description: pacid=50575490...	0.03	OrthoFinder output from all 47 species
Ceric.21G081600.1	PUB26, Ceric.21G081600	U-Box-group-III E3 ubiquitin ligase & original...	0.04	OrthoFinder output from all 47 species
Dcu_g01521	PUB8, B80	E3 ubiquitin ligase *(PUB8) & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g07421	PUB23	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g11691	PUB26	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g26825	PUB26	not classified & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01011139001	PUB23	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01011140001	PUB23	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01011616001	CMPG1, ATCMPG1	U-box domain-containing protein 20 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Gb_11650	PUB26	U-box domain-containing protein 26 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Gb_17119	PUB22	E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis...	0.05	OrthoFinder output from all 47 species
Gb_27794	No alias	U-box domain-containing protein 21 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Gb_29734	PUB25	U-box domain-containing protein 25 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Gb_29851	No alias	U-box domain-containing protein 21 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
LOC_Os02g46500.1	PUB23, LOC_Os02g46500	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
LOC_Os02g50460.1	LOC_Os02g50460	U-box domain-containing protein 20 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
LOC_Os04g34030.1	PUB23, LOC_Os04g34030	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
LOC_Os04g49970.1	PUB23, LOC_Os04g49970	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
LOC_Os12g06410.1	PUB24, LOC_Os12g06410	E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
MA_311559g0010	PUB22	E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_48004g0010	No alias	E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_481299g0010	PUB23	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_52661g0010	No alias	U-box domain-containing protein 21 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_5536318g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_779502g0010	PUB23	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_83739g0020	PUB26	U-box domain-containing protein 26 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Mp2g06090.1	PUB25	E3 ubiquitin ligase (PUB)	0.02	OrthoFinder output from all 47 species
Mp3g22750.1	PUB26	U-box domain-containing protein 26 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Msp_g38744	PUB26	U-Box-group-III E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g09373	PUB26	U-Box-group-III E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g08920	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g08921	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g21834	PUB25	U-Box-group-III E3 ubiquitin ligase & original description: none	0.05	OrthoFinder output from all 47 species
Ore_g29544	PUB23	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g33878	PUB26	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g42463	PUB23	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Pnu_g19356	PUB26	U-Box-group-III E3 ubiquitin ligase & original description: none	0.05	OrthoFinder output from all 47 species
Ppi_g32476	PUB25	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0033.g011093	PUB23	not classified & original description: CDS=1-1278	0.05	OrthoFinder output from all 47 species
Smo104879	PUB25	U-box domain-containing protein 25 OS=Arabidopsis thaliana	0.05	OrthoFinder output from all 47 species
Solyc01g007000.4.1	PUB22, Solyc01g007000	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Solyc01g007010.2.1	PUB22, Solyc01g007010	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Solyc01g007020.4.1	PUB23, Solyc01g007020	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Solyc01g007040.4.1	PUB22, Solyc01g007040	E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Solyc01g107980.3.1	PUB26, Solyc01g107980	U-box domain-containing protein 25 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Solyc04g008100.3.1	Solyc04g008100	U-box domain-containing protein 21 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Solyc04g077610.4.1	Solyc04g077610	U-box domain-containing protein 30 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Solyc05g056500.1.1	PUB26, Solyc05g056500	U-box domain-containing protein 26 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Solyc06g074140.1.1	PUB24, Solyc06g074140	E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Solyc11g005700.1.1	CMPG2, ATCMPG2,...	E3 ubiquitin ligase (PUB)	0.03	OrthoFinder output from all 47 species
Solyc11g006030.1.1	Solyc11g006030	U-box domain-containing protein 21 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Solyc11g068940.1.1	PUB24, Solyc11g068940	E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Spa_g03410	PUB26	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g47017	PUB23	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e007109_P001	PUB23, Zm00001e007109	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Zm00001e008167_P001	PUB23, Zm00001e008167	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Zm00001e014779_P001	PUB26, Zm00001e014779	U-box domain-containing protein 26 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Zm00001e036030_P001	Zm00001e036030	U-box domain-containing protein 21 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	15	86

External Links

No external refs found!

Aspi01Gene19355.t1 (PUB26, Aspi01Gene19355)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation