Aspi01Gene19342.t1 (PUB26, Aspi01Gene19342)

Aliases : PUB26, Aspi01Gene19342

Description : not classified & original description: none

Gene families : OG0000127 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000127_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene19342.t1
Cluster	HCCA: Cluster_16

Target	Alias	Description	ECC score	Gene Family Method
AT3G19380	PUB25	plant U-box 25	0.05	OrthoFinder output from all 47 species
AT3G52450	PUB22	plant U-box 22	0.03	OrthoFinder output from all 47 species
AT5G64660	CMPG2, ATCMPG2	CYS, MET, PRO, and GLY protein 2	0.03	OrthoFinder output from all 47 species
AT5G65920	No alias	ARM repeat superfamily protein	0.04	OrthoFinder output from all 47 species
Adi_g003285	PUB25	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g014414	PUB25	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g077173	PUB25	U-Box-group-III E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g077175	PUB26	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g02974	PUB23	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g38062	PUB25	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Ala_g02187	PUB8, B80	E3 ubiquitin ligase *(PUB8) & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g06990	PUB23	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g10929	PUB26	U-Box-group-III E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Als_g23643	PUB26	U-Box-group-III E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
Als_g30969	PUB25	U-Box-group-III E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
Als_g32770	PUB15	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g33086	PUB26	U-Box-group-III E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Als_g37093	PUB26	U-Box-group-III E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Als_g62359	PUB26	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g12417	PUB26	U-Box-group-III E3 ubiquitin ligase & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g20185	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aob_g34288	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene18444.t1	PUB23, Aspi01Gene18444	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene18467.t1	PUB23, Aspi01Gene18467	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Aspi01Gene19337.t1	PUB26, Aspi01Gene19337	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene19351.t1	Aspi01Gene19351	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Aspi01Gene22942.t1	PUB26, Aspi01Gene22942	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene33499.t1	PUB25, Aspi01Gene33499	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene51624.t1	PUB15, Aspi01Gene51624	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene60604.t1	PUB26, Aspi01Gene60604	U-Box-group-III E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.07G004600.1	PUB26, Ceric.07G004600	E3 ubiquitin ligase & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.08G042000.1	Ceric.08G042000	E3 ubiquitin ligase & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.10G007700.1	PUB23, Ceric.10G007700	not classified & original description: pacid=50612519...	0.04	OrthoFinder output from all 47 species
Ceric.21G081600.1	PUB26, Ceric.21G081600	U-Box-group-III E3 ubiquitin ligase & original...	0.04	OrthoFinder output from all 47 species
Dcu_g01209	PUB23	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g07421	PUB23	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g11691	PUB26	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g18954	PUB25	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g18955	PUB26	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g03660	PUB23	not classified & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01011139001	PUB23	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
GSVIVT01011140001	PUB23	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
GSVIVT01011616001	CMPG1, ATCMPG1	U-box domain-containing protein 20 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01026764001	PUB22	E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Gb_02627	No alias	U-box domain-containing protein 21 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Gb_11650	PUB26	U-box domain-containing protein 26 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Gb_27794	No alias	U-box domain-containing protein 21 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Gb_29851	No alias	U-box domain-containing protein 21 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
LOC_Os02g33680.1	CMPG2, ATCMPG2,...	U-box domain-containing protein 29 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
LOC_Os02g34410.1	PUB25, LOC_Os02g34410	U-box domain-containing protein 25 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
LOC_Os02g50460.1	LOC_Os02g50460	U-box domain-containing protein 20 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
LOC_Os12g06410.1	PUB24, LOC_Os12g06410	E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Len_g01213	PUB25	U-Box-group-III E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Len_g16219	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Len_g31416	PUB23	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g24284	PUB25	not classified & original description: none	0.04	OrthoFinder output from all 47 species
MA_10432179g0010	PUB22	E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_10433846g0010	PUB23	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_126399g0010	PUB26	U-box domain-containing protein 25 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
MA_410546g0010	PUB23	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
MA_415393g0010	PUB25	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_684442g0010	PUB23	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_8837995g0010	PUB26	U-box domain-containing protein 26 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_95662g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_95906g0010	PUB23	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Mp7g11000.1	PUB25	U-box domain-containing protein 25 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Mp7g11020.1	PUB25	E3 ubiquitin ligase (PUB)	0.02	OrthoFinder output from all 47 species
Msp_g38744	PUB26	U-Box-group-III E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g06628	PUB25	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g09512	PUB29, ATPUB29	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g08919	PUB25	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g29544	PUB23	E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g33878	PUB26	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g33879	PUB26	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g35004	PUB26	U-Box-group-III E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g36530	PUB23	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g42463	PUB23	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g12799	PUB29, ATPUB29	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Pir_g34239	No alias	E3 ubiquitin ligase & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g50063	PUB23	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g27483	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g06864	PUB26	U-Box-group-III E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g15131	No alias	E3 ubiquitin ligase *(PUB8) & original description: none	0.03	OrthoFinder output from all 47 species
Smo416356	PUB26	U-box domain-containing protein 30 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Solyc01g007030.3.1	PUB22, Solyc01g007030	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Solyc01g009330.1.1	PUB22, Solyc01g009330	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Solyc04g071030.1.1	Solyc04g071030	E3 ubiquitin ligase (PUB)	0.05	OrthoFinder output from all 47 species
Solyc06g074140.1.1	PUB24, Solyc06g074140	E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Solyc11g068920.1.1	PUB23, Solyc11g068920	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Tin_g08092	PUB25	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e008167_P001	PUB23, Zm00001e008167	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Zm00001e014752_P001	PUB23, Zm00001e014752	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Zm00001e014766_P001	CMPG2, ATCMPG2,...	E3 ubiquitin ligase (PUB)	0.03	OrthoFinder output from all 47 species
Zm00001e036030_P001	Zm00001e036030	U-box domain-containing protein 21 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Zm00001e038657_P001	Zm00001e038657	U-box domain-containing protein 75 OS=Oryza sativa...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	59	129

External Links

No external refs found!

Aspi01Gene19342.t1 (PUB26, Aspi01Gene19342)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation