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  5. Aspi01Gene18266.t1

Aspi01Gene18266.t1 (Aspi01Gene18266)


Aliases : Aspi01Gene18266

Description : RING-H2-class ATL-subclass E3 ubiquitin ligase & original description: none


Gene families : OG0002999 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002999_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene18266.t1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00242060 ATL43,... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AT4G28890 No alias RING/U-box superfamily protein 0.05 OrthoFinder output from all 47 species
AT5G05810 ATL43 RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
Azfi_s0072.g037044 ATL43 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.02G098900.1 Ceric.02G098900 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
GSVIVT01015336001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01029257001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Gb_16540 ATL43 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
MA_179334g0010 No alias RING-H2-class E3 ligase 0.01 OrthoFinder output from all 47 species
MA_35091g0010 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Pir_g36297 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30667 ATL43 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003504 ATL43 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0074.g017194 ATL43 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Solyc05g018310.1.1 Solyc05g018310 RING-H2-class E3 ligase 0.05 OrthoFinder output from all 47 species
Solyc07g007440.1.1 ATL43, Solyc07g007440 RING-H2-class E3 ligase 0.01 OrthoFinder output from all 47 species
Zm00001e013130_P001 ATL43, Zm00001e013130 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e032612_P001 Zm00001e032612 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 128 171
No external refs found!