Solyc01g060470.3.1 (Solyc01g060470.3)


Aliases : Solyc01g060470.3

Description : 29.3.1 protein.targeting.nucleus Protein interacts with Agrobacterium proteins VirD2 and VirE2. Is not individually essential for Agrobacterium-mediated root transformation, but when overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype. importin alpha isoform 2 (IMPA-2)


Gene families : OG_01_0000716 (Gene family) Phylogenetic Tree(s): OG0000716_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc01g060470.3.1
Cluster HCCA cluster: Cluster_221

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01031205001 No alias 29.3.1 protein.targeting.nucleus Protein interacts with... 0.03 Gene family
GSVIVT01035047001 No alias 29.3.1 protein.targeting.nucleus Protein interacts with... 0.02 Gene family
LOC_Os05g06350 Os05g0155500,... 29.3.1 protein.targeting.nucleus Encodes importin alpha... 0.02 Gene family

Type GO Term Name Evidence Source
BP GO:0006606 protein import into nucleus IEA InterProScan
MF GO:0061608 nuclear import signal receptor activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR032413 Arm_3 457 501
IPR000225 Armadillo 108 148
IPR000225 Armadillo 192 233
IPR000225 Armadillo 277 315
IPR000225 Armadillo 150 189
IPR000225 Armadillo 361 400
IPR000225 Armadillo 246 274
IPR000225 Armadillo 405 442
IPR000225 Armadillo 319 359
IPR002652 Importin-a_IBB 12 97
No external refs found!