Aspi01Gene17960.t1 (CNGC15, ATCNGC15,...)

Aliases : CNGC15, ATCNGC15, Aspi01Gene17960

Description : cyclic nucleotide-gated cation channel *(CNGC) & original description: none

Gene families : OG0000170 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000170_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene17960.t1

Target	Alias	Description	ECC score	Gene Family Method
Azfi_s0069.g036528	CNGC15, ATCNGC15	cyclic nucleotide-gated cation channel *(CNGC) &...	0.04	OrthoFinder output from all 47 species
LOC_Os01g57370.1	DND2, CNGC4,...	cyclic nucleotide-gated cation channel (CNGC)	0.02	OrthoFinder output from all 47 species
LOC_Os02g15580.1	ATCNGC1, CNGC1,...	cyclic nucleotide-gated cation channel (CNGC)	0.03	OrthoFinder output from all 47 species
MA_10425832g0010	CNGC7, ATCNGC7	cyclic nucleotide-gated cation channel (CNGC)	0.03	OrthoFinder output from all 47 species
Pp3c15_7250V3.1	DND1, ATCNGC2,...	cyclic nucleotide-gated cation channel 4	0.01	OrthoFinder output from all 47 species
Ppi_g06447	CNGC7, ATCNGC7	cyclic nucleotide-gated cation channel *(CNGC) &...	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004661	CNGC7, ATCNGC7	cyclic nucleotide-gated cation channel *(CNGC) &...	0.03	OrthoFinder output from all 47 species
Spa_g10308	CNGC15, ATCNGC15	cyclic nucleotide-gated cation channel *(CNGC) &...	0.01	OrthoFinder output from all 47 species
Zm00001e016088_P002	ATCNGC17,...	cyclic nucleotide-gated cation channel (CNGC)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	monoatomic ion channel activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR005821	Ion_trans_dom	88	366

External Links

No external refs found!