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Aliases : SHP2, AGL5, Aspi01Gene17800
Description : MADS/AGL-type transcription factor & original description: none
Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00218870 | ANR1, AGL44,... | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00010p00264750 | AGL30,... | RNA biosynthesis.transcriptional activation.MADS box... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00089p00081270 | PI,... | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00109p00015260 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.MADS box... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00109p00019490 | AGL16,... | No description available | 0.02 | OrthoFinder output from all 47 species | |
| AT1G24260 | AGL9, SEP3 | K-box region and MADS-box transcription factor family protein | 0.02 | OrthoFinder output from all 47 species | |
| AT2G42830 | SHP2, AGL5 | K-box region and MADS-box transcription factor family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G11880 | AGL14 | AGAMOUS-like 14 | 0.04 | OrthoFinder output from all 47 species | |
| AT5G20240 | PI | K-box region and MADS-box transcription factor family protein | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g07724 | STK, AGL11 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene15814.t1 | SHP2, AGL5,... | MADS/AGL-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene17593.t1 | AGL104, Aspi01Gene17593 | MADS/AGL-type transcription factor & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Aspi01Gene17819.t1 | SHP2, AGL5,... | MADS/AGL-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene54037.t3 | Aspi01Gene54037 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0684.g082058 | AGL21 | MADS/AGL-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g13784 | SHP2, AGL5 | MADS/AGL-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g41755 | SHP2, AGL5 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.12G051600.1 | AGL71, Ceric.12G051600 | MADS/AGL-type transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.33G065500.1 | AGL13, Ceric.33G065500 | MADS/AGL-type transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g38503 | AGL42 | MADS/AGL-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01010221001 | AGL62 | RNA biosynthesis.transcriptional activation.MADS box... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01033253001 | AGL15 | RNA biosynthesis.transcriptional activation.MADS box... | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01035477001 | AGL30 | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_03068 | AGL16 | transcription factor (MADS/AGL) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os02g07430.1 | AGL32, TT16,... | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g11614.1 | AGL2, SEP1,... | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g38722 | AGL1, SHP1 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_19007g0020 | SOC1, AGL20, ATSOC1 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
| MA_6544g0010 | STK, AGL11 | Floral homeotic protein AGAMOUS OS=Panax ginseng... | 0.03 | OrthoFinder output from all 47 species | |
| MA_78010g0010 | SHP2, AGL5 | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
| MA_8748850g0010 | AGL24 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g11366 | AGL3, SEP4 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g38833 | AGL21 | MADS/AGL-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ore_g42895 | AGL16 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g02990 | SOC1, AGL20, ATSOC1 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g40304 | GL19, AGL19 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g48804 | AGL8, FUL | regulatory protein *(AP1/CAL/FUL) of floral meristem... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g33302 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g091550.2.1 | AGL21, Solyc02g091550 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc10g044965.1.1 | AGL21, Solyc10g044965 | transcription factor (MADS/AGL) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc12g056460.3.1 | SOC1, AGL20,... | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g31312 | AGL2, SEP1 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e000846_P003 | AGL4, SEP2,... | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e003667_P001 | AGL9, SEP3,... | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e005705_P004 | AGL7, AP1, Zm00001e005705 | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e015447_P001 | AGL6, Zm00001e015447 | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e034629_P001 | AGL9, SEP3,... | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e038716_P004 | AGL9, SEP3,... | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | Interproscan |
| MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002100 | TF_MADSbox | 44 | 91 |
| No external refs found! |